Annotation Detail for FBXO4
Basic Information Top
| Gene Symbol: | FBXO4 ( DKFZp547N213,FBX4,FLJ10141 ) |
|---|---|
| Gene Full Name: | F-box protein 4 |
| Band: | 5p13.1 |
| Quick Links | Entrez ID:26272; OMIM: 609090; Uniprot ID:FBX4_HUMAN; ENSEMBL ID: ENSG00000151876; HGNC ID: 13583 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.165575
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 10 / 564012 | 17 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 34 / 1939121 | 17 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 1 / 17475 | 57 |  |
| breast (mammary gland) tumor | 1 / 94178 | 10 |  |
| cervical tumor | 2 / 34366 | 58 | |
| chondrosarcoma | 3 / 82823 | 36 | |
| colorectal tumor | 4 / 114246 | 35 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 7 / 119369 | 58 | |
| germ cell tumor | 0 / 263845 | 0 | |
| glioma | 2 / 106883 | 18 | |
| head and neck tumor | 3 / 136302 | 22 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 2 / 103127 | 19 | |
| lymphoma | 1 / 71755 | 13 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 46 / 3360307 | 13 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 4 / 104616 | 38 | |
| primitive neuroectodermal tumor of the CNS | 2 / 125680 | 15 | |
| prostate cancer | 2 / 102680 | 19 | |
| retinoblastoma | 4 / 46356 | 86 | |
| skin tumor | 2 / 124949 | 16 | |
| soft tissue/muscle tissue tumor | 1 / 125191 | 7 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 1 / 29757 | 33 | |
| blood | 1 / 123478 | 8 | |
| bone | 2 / 71655 | 27 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 12 / 1100989 | 10 | |
| cervix | 2 / 48171 | 41 | |
| connective tissue | 3 / 149255 | 20 | |
| ear | 1 / 16212 | 61 | |
| embryonic tissue | 4 / 215722 | 18 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 4 / 211054 | 18 | |
| heart | 0 / 89626 | 0 | |
| intestine | 4 / 234472 | 17 | |
| kidney | 2 / 211777 | 9 | |
| larynx | 3 / 24145 | 124 | |
| liver | 1 / 207743 | 4 | |
| lung | 4 / 336974 | 11 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 6 / 91610 | 65 | |
| mammary gland | 1 / 153271 | 6 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 1 / 102051 | 9 | |
| pancreas | 7 / 214812 | 32 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 3 / 280825 | 10 | |
| prostate | 4 / 189345 | 21 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 2 / 210574 | 9 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 9 / 96619 | 93 | |
| testis | 6 / 330442 | 18 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 3 / 232878 | 12 | |
| vascular | 1 / 51780 | 19 | |
Microarray in - Probe name: A_23_P58815
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 2.81 ± 0.91 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 2.36 ± 0.22 | |
| Basal Part of Pons | 2.14 ± 0.43 | |
| Cerebellar Cortex | 2.61 ± 0.57 | |
| Cerebellar Nuclei | 2.57 ± 0.72 | |
| Claustrum | 2.87 ± 0.58 | |
| Epithalamus | 1.99 ± 0.7 | |
| Frontal Lobe | 2.32 ± 0.68 | |
| Globus Pallidus | 2.36 ± 0.57 | |
| Hypothalamus | 2.45 ± 0.5 | |
| Insula | 2.61 ± 0.95 | |
| Limbic Lobe | 2.35 ± 0.59 | |
| Mesencephalon | 2.57 ± 0.75 | |
| Myelencephalon | 2.38 ± 0.64 | |
| Occipital Lobe | 2.47 ± 0.83 | |
| Parietal Lobe | 2.22 ± 0.65 | |
| Pontine Tegmentum | 2.38 ± 0.61 | |
| Striatum | 2.1 ± 0.59 | |
| Subthalamus | 2.48 ± 0.59 | |
| Temporal Lobe | 2.4 ± 0.69 | |
| Thalamus | 2.34 ± 0.63 | |
| White Matter | 2.59 ± 0.62 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Fbxo4 | CB | Cerebellum | 0.28 | |
| 0.58 | | |||
| Fbxo4 | CTX | Cerebral cortex | 0.89 | |
| 1.21 | | |||
| Fbxo4 | HIP | Hippocampal region | 0.96 | |
| 0.77 | | |||
| Fbxo4 | HPF | Hippocampal formation | 0.63 | |
| 0.49 | | |||
| Fbxo4 | HY | Hypothalamus | 0.08 | |
| 0.11 | | |||
| Fbxo4 | LSX | Lateral septal complex | 0.26 | |
| 0.16 | | |||
| Fbxo4 | MB | Midbrain | 0.2 | |
| 0.51 | | |||
| Fbxo4 | MY | Medulla | 0.03 | |
| 0.07 | | |||
| Fbxo4 | OLF | Olfactory bulb | 1.36 | |
| 2.76 | | |||
| Fbxo4 | P | Pons | 0.09 | |
| 0.21 | | |||
| Fbxo4 | PAL | Pallidum | 0.17 | |
| 0.26 | | |||
| Fbxo4 | RHP | Retrohippocampal region | 0.08 | |
| 0.09 | | |||
| Fbxo4 | sAMY | Striatum-like amygdalar nuclei | 0.12 | |
| 0.59 | | |||
| Fbxo4 | STR | Striatum | 0.14 | |
| 0.16 | | |||
| Fbxo4 | STRd | Striatum dorsal region | 0.12 | |
| 0.11 | | |||
| Fbxo4 | STRv | Striatum ventral region | 0.22 | |
| 0.16 | | |||
| Fbxo4 | TH | Thalamus | 0.39 | |
| 0.39 | |