AutismKB 2.0

Annotation Detail for TINF2


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Basic Information Top
Gene Symbol:TINF2 ( TIN2 )
Gene Full Name: TERF1 (TRF1)-interacting nuclear factor 2
Band: 14q12
Quick LinksEntrez ID:26277; OMIM: 604319; Uniprot ID:TINF2_HUMAN; ENSEMBL ID: ENSG00000092330; HGNC ID: 11824
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body3 / 7076142
blastocyst1 / 6231916
fetus54 / 56401295
neonate3 / 3109796
infant3 / 23620127
juvenile6 / 55556107
adult185 / 193912195
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor3 / 12794234
bladder carcinoma0 / 174750 
breast (mammary gland) tumor1 / 9417810
cervical tumor0 / 343660 
chondrosarcoma8 / 8282396
colorectal tumor3 / 11424626
esophageal tumor0 / 172900 
gastrointestinal tumor3 / 11936925
germ cell tumor19 / 26384572
glioma7 / 10688365
head and neck tumor5 / 13630236
kidney tumor10 / 68959145
leukemia6 / 9584262
liver tumor8 / 9635983
lung tumor6 / 10312758
lymphoma11 / 71755153
non-neoplasia7 / 9725071
normal303 / 336030790
ovarian tumor19 / 76682247
pancreatic tumor9 / 10461686
primitive neuroectodermal tumor of the CNS32 / 125680254
prostate cancer2 / 10268019
retinoblastoma7 / 46356151
skin tumor8 / 12494964
soft tissue/muscle tissue tumor6 / 12519147
uterine tumor6 / 9025766
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue2 / 13106152
adrenal gland5 / 33197150
ascites2 / 4001549
bladder2 / 2975767
blood15 / 123478121
bone4 / 7165555
bone marrow5 / 48801102
brain91 / 110098982
cervix2 / 4817141
connective tissue11 / 14925573
ear4 / 16212246
embryonic tissue4 / 21572218
esophagus0 / 202090 
eye12 / 21105456
heart14 / 89626156
intestine10 / 23447242
kidney24 / 211777113
larynx0 / 241450 
liver18 / 20774386
lung37 / 336974109
lymph5 / 44270112
lymph node11 / 91610120
mammary gland5 / 15327132
mouth3 / 6705244
muscle2 / 10771518
nerve0 / 157680 
ovary21 / 102051205
pancreas13 / 21481260
parathyroid17 / 20539827
pharynx0 / 413280 
pituitary gland1 / 1658560
placenta39 / 280825138
prostate6 / 18934531
salivary gland4 / 20155198
skin20 / 21057494
spleen10 / 53952185
stomach8 / 9661982
testis8 / 33044224
thymus12 / 81131147
thyroid2 / 4747342
tonsil0 / 169990 
trachea2 / 5241338
umbilical cord2 / 13680146
uterus28 / 232878120
vascular5 / 5178096
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 220052_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts190.5
Adipocyte38.35
AdrenalCortex39.9
Adrenalgland69.3
Amygdala39.9
Appendix73.4
AtrioventricularNode51.95
BDCA4+_DentriticCells133.2
Bonemarrow74.8
BronchialEpithelialCells107.65
CD105+_Endothelial63.95
CD14+_Monocytes146.3
CD19+_BCells(neg._sel.)254.2
CD33+_Myeloid186.5
CD34+89.35
CD4+_Tcells143.55
CD56+_NKCells262.05
CD71+_EarlyErythroid59.4
CD8+_Tcells104.7
CardiacMyocytes80.85
Caudatenucleus37.1
Cerebellum60.65
CerebellumPeduncles68.95
CiliaryGanglion38.2
CingulateCortex69.35
Colorectaladenocarcinoma38.3
DorsalRootGanglion66.4
FetalThyroid28.55
Fetalbrain43.05
Fetalliver29.45
Fetallung42.9
GlobusPallidus45.65
Heart53.75
Hypothalamus47.25
Kidney42.95
Leukemia_chronicMyelogenousK-56225.85
Leukemia_promyelocytic-HL-6040.2
Leukemialymphoblastic(MOLT-4)29.2
Liver40
Lung86.8
Lymphnode51.25
Lymphoma_burkitts(Daudi)71.15
Lymphoma_burkitts(Raji)90.2
MedullaOblongata32.75
OccipitalLobe33.25
OlfactoryBulb69.4
Ovary45.7
Pancreas35.4
PancreaticIslet59.55
ParietalLobe42.25
Pituitary52.4
Placenta72.85
Pons58.2
PrefrontalCortex50.15
Prostate47.8
Salivarygland49.35
SkeletalMuscle47.85
Skin53.95
SmoothMuscle39.5
Spinalcord57.3
SubthalamicNucleus58.65
SuperiorCervicalGanglion118.2
TemporalLobe42.35
Testis31.3
TestisGermCell26.85
TestisIntersitial23.25
TestisLeydigCell38.05
TestisSeminiferousTubule36.9
Thalamus35.85
Thymus41.8
Thyroid62.1
Tongue76.75
Tonsil47.35
Trachea48.15
TrigeminalGanglion105.65
Uterus34.1
UterusCorpus55.85
WholeBlood175.9
Wholebrain35.2
colon38.65
pineal_day83.1
pineal_night71.42
retina111.75
small_intestine37.75
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P77020
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala8.67 ± 0.31
Basal Forebrain8.87 ± 0.16
Basal Part of Pons9.14 ± 0.25
Cerebellar Cortex9.24 ± 0.19
Cerebellar Nuclei9.13 ± 0.24
Claustrum8.53 ± 0.53
Epithalamus9.05 ± 0.24
Frontal Lobe9.09 ± 0.24
Globus Pallidus9.02 ± 0.17
Hypothalamus9.18 ± 0.22
Insula9.1 ± 0.24
Limbic Lobe8.71 ± 0.31
Mesencephalon8.93 ± 0.31
Myelencephalon8.98 ± 0.3
Occipital Lobe8.7 ± 0.3
Parietal Lobe8.96 ± 0.34
Pontine Tegmentum8.93 ± 0.33
Striatum8.7 ± 0.24
Subthalamus8.96 ± 0.3
Temporal Lobe9.02 ± 0.25
Thalamus9.07 ± 0.26
White Matter9.62 ± 0.15
Mouse Brain ISH
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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