Annotation Detail for LATS2
Basic Information Top
| Gene Symbol: | LATS2 ( FLJ13161,KPM ) |
|---|---|
| Gene Full Name: | LATS, large tumor suppressor, homolog 2 (Drosophila) |
| Band: | 13q12.11 |
| Quick Links | Entrez ID:26524; OMIM: 604861; Uniprot ID:LATS2_HUMAN; ENSEMBL ID: ENSG00000150457; HGNC ID: 6515 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.78960
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 5 / 70761 | 70 |  |
| blastocyst | 1 / 62319 | 16 |  |
| fetus | 25 / 564012 | 44 | |
| neonate | 0 / 31097 | 0 | |
| infant | 1 / 23620 | 42 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 56 / 1939121 | 28 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 1 / 17475 | 57 | |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 4 / 82823 | 48 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 4 / 119369 | 33 | |
| germ cell tumor | 1 / 263845 | 3 |  |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 1 / 136302 | 7 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 1 / 95842 | 10 | |
| liver tumor | 3 / 96359 | 31 | |
| lung tumor | 3 / 103127 | 29 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 138 / 3360307 | 41 | |
| ovarian tumor | 3 / 76682 | 39 | |
| pancreatic tumor | 1 / 104616 | 9 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 1 / 102680 | 9 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 1 / 124949 | 8 | |
| soft tissue/muscle tissue tumor | 2 / 125191 | 15 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 2 / 123478 | 16 | |
| bone | 3 / 71655 | 41 | |
| bone marrow | 4 / 48801 | 81 | |
| brain | 8 / 1100989 | 7 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 3 / 149255 | 20 | |
| ear | 3 / 16212 | 185 | |
| embryonic tissue | 10 / 215722 | 46 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 4 / 211054 | 18 | |
| heart | 2 / 89626 | 22 | |
| intestine | 8 / 234472 | 34 | |
| kidney | 11 / 211777 | 51 | |
| larynx | 1 / 24145 | 41 | |
| liver | 10 / 207743 | 48 | |
| lung | 12 / 336974 | 35 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 2 / 91610 | 21 | |
| mammary gland | 3 / 153271 | 19 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 2 / 107715 | 18 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 3 / 102051 | 29 | |
| pancreas | 11 / 214812 | 51 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 14 / 280825 | 49 | |
| prostate | 4 / 189345 | 21 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 4 / 210574 | 18 | |
| spleen | 2 / 53952 | 37 | |
| stomach | 10 / 96619 | 103 | |
| testis | 17 / 330442 | 51 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 1 / 232878 | 4 | |
| vascular | 8 / 51780 | 154 | |
Microarray in - Probe name: A_24_P70002
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 3.29 ± 0.85 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 3.17 ± 0.56 | |
| Basal Part of Pons | 2.59 ± 0.42 | |
| Cerebellar Cortex | 3.68 ± 0.61 | |
| Cerebellar Nuclei | 3.47 ± 0.74 | |
| Claustrum | 3.48 ± 0.88 | |
| Epithalamus | 3.35 ± 0.6 | |
| Frontal Lobe | 3.26 ± 0.75 | |
| Globus Pallidus | 4.17 ± 0.83 | |
| Hypothalamus | 2.56 ± 0.43 | |
| Insula | 2.97 ± 0.94 | |
| Limbic Lobe | 3.63 ± 1.01 | |
| Mesencephalon | 3.27 ± 0.65 | |
| Myelencephalon | 3.41 ± 0.7 | |
| Occipital Lobe | 3.94 ± 0.86 | |
| Parietal Lobe | 3.17 ± 0.78 | |
| Pontine Tegmentum | 3.68 ± 0.71 | |
| Striatum | 3.65 ± 1.29 | |
| Subthalamus | 3.59 ± 0.6 | |
| Temporal Lobe | 3.16 ± 0.79 | |
| Thalamus | 3.6 ± 0.77 | |
| White Matter | 4.26 ± 0.73 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Lats2 | CB | Cerebellum | 25.25 | |
| 37.76 | | |||
| Lats2 | CTX | Cerebral cortex | 9.64 | |
| 7.67 | | |||
| Lats2 | HIP | Hippocampal region | 41.15 | |
| 72.44 | | |||
| Lats2 | HPF | Hippocampal formation | 29.52 | |
| 44.34 | | |||
| Lats2 | HY | Hypothalamus | 1.77 | |
| 1.45 | | |||
| Lats2 | LSX | Lateral septal complex | 46.24 | |
| 48.99 | | |||
| Lats2 | MB | Midbrain | 5.92 | |
| 6.71 | | |||
| Lats2 | MY | Medulla | 7.94 | |
| 8.8 | | |||
| Lats2 | OLF | Olfactory bulb | 10.39 | |
| 9.32 | | |||
| Lats2 | P | Pons | 6.05 | |
| 6.4 | | |||
| Lats2 | PAL | Pallidum | 4.43 | |
| 4.42 | | |||
| Lats2 | RHP | Retrohippocampal region | 13.8 | |
| 12.17 | | |||
| Lats2 | sAMY | Striatum-like amygdalar nuclei | 2.12 | |
| 1.83 | | |||
| Lats2 | STR | Striatum | 8.69 | |
| 9.42 | | |||
| Lats2 | STRd | Striatum dorsal region | 4.71 | |
| 4.45 | | |||
| Lats2 | STRv | Striatum ventral region | 9.56 | |
| 12.56 | | |||
| Lats2 | TH | Thalamus | 10.57 | |
| 11.55 | |