Annotation Detail for GGT7
Basic Information Top
| Gene Symbol: | GGT7 ( D20S101,GGT4,GGTL3,GGTL5,dJ18C9.2 ) |
|---|---|
| Gene Full Name: | gamma-glutamyltransferase 7 |
| Band: | 20q11.22 |
| Quick Links | Entrez ID:2686; OMIM: 612342; Uniprot ID:GGT7_HUMAN; ENSEMBL ID: ENSG00000131067; HGNC ID: 4259 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.433738
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 6 / 70761 | 84 |  |
| blastocyst | 3 / 62319 | 48 |  |
| fetus | 27 / 564012 | 47 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 126 / 1939121 | 64 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 3 / 17475 | 171 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 |  |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 2 / 114246 | 17 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 1 / 119369 | 8 | |
| germ cell tumor | 2 / 263845 | 7 | |
| glioma | 13 / 106883 | 121 | |
| head and neck tumor | 12 / 136302 | 88 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 4 / 95842 | 41 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 5 / 103127 | 48 | |
| lymphoma | 1 / 71755 | 13 | |
| non-neoplasia | 4 / 97250 | 41 | |
| normal | 193 / 3360307 | 57 | |
| ovarian tumor | 1 / 76682 | 13 | |
| pancreatic tumor | 1 / 104616 | 9 | |
| primitive neuroectodermal tumor of the CNS | 6 / 125680 | 47 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 1 / 46356 | 21 | |
| skin tumor | 1 / 124949 | 8 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 4 / 90257 | 44 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 1 / 13106 | 76 | |
| adrenal gland | 2 / 33197 | 60 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 1 / 29757 | 33 | |
| blood | 4 / 123478 | 32 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 82 / 1100989 | 74 | |
| cervix | 1 / 48171 | 20 | |
| connective tissue | 2 / 149255 | 13 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 16 / 215722 | 74 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 8 / 211054 | 37 | |
| heart | 6 / 89626 | 66 | |
| intestine | 9 / 234472 | 38 | |
| kidney | 11 / 211777 | 51 | |
| larynx | 5 / 24145 | 207 |  |
| liver | 0 / 207743 | 0 | |
| lung | 29 / 336974 | 86 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 2 / 91610 | 21 | |
| mammary gland | 1 / 153271 | 6 | |
| mouth | 3 / 67052 | 44 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 7 / 102051 | 68 | |
| pancreas | 16 / 214812 | 74 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 2 / 41328 | 48 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 11 / 280825 | 39 | |
| prostate | 15 / 189345 | 79 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 1 / 210574 | 4 | |
| spleen | 3 / 53952 | 55 | |
| stomach | 0 / 96619 | 0 | |
| testis | 6 / 330442 | 18 | |
| thymus | 4 / 81131 | 49 | |
| thyroid | 3 / 47473 | 63 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 4 / 232878 | 17 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_23_P57236
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 5.44 ± 0.45 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 4.8 ± 0.72 | |
| Basal Part of Pons | 5.59 ± 0.46 | |
| Cerebellar Cortex | 5.76 ± 0.39 | |
| Cerebellar Nuclei | 4.89 ± 0.62 | |
| Claustrum | 4.87 ± 0.76 | |
| Epithalamus | 4.61 ± 0.48 | |
| Frontal Lobe | 5.44 ± 0.57 | |
| Globus Pallidus | 4.21 ± 0.28 | |
| Hypothalamus | 4.72 ± 0.7 | |
| Insula | 5.35 ± 0.52 | |
| Limbic Lobe | 5.36 ± 0.59 | |
| Mesencephalon | 5.1 ± 0.64 | |
| Myelencephalon | 5.29 ± 0.57 | |
| Occipital Lobe | 5.18 ± 0.55 | |
| Parietal Lobe | 5.3 ± 0.49 | |
| Pontine Tegmentum | 5.18 ± 0.66 | |
| Striatum | 4.51 ± 0.49 | |
| Subthalamus | 5.61 ± 0.64 | |
| Temporal Lobe | 5.54 ± 0.42 | |
| Thalamus | 5.21 ± 0.44 | |
| White Matter | 4.33 ± 0.56 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Ggtl3 | CB | Cerebellum | 39.9 | |
| 80.11 | | |||
| Ggtl3 | CTX | Cerebral cortex | 100 | |
| 100 | | |||
| Ggtl3 | HIP | Hippocampal region | 100 | |
| 100 | | |||
| Ggtl3 | HPF | Hippocampal formation | 100 | |
| 100 | | |||
| Ggtl3 | HY | Hypothalamus | 77.14 | |
| 84.42 | | |||
| Ggtl3 | LSX | Lateral septal complex | 100 | |
| 100 | | |||
| Ggtl3 | MB | Midbrain | 80.42 | |
| 100 | | |||
| Ggtl3 | MY | Medulla | 54.04 | |
| 100 | | |||
| Ggtl3 | OLF | Olfactory bulb | 100 | |
| 100 | | |||
| Ggtl3 | P | Pons | 62.46 | |
| 100 | | |||
| Ggtl3 | PAL | Pallidum | 86.87 | |
| 100 | | |||
| Ggtl3 | RHP | Retrohippocampal region | 100 | |
| 100 | | |||
| Ggtl3 | sAMY | Striatum-like amygdalar nuclei | 95.35 | |
| 93.18 | | |||
| Ggtl3 | STR | Striatum | 91.13 | |
| 83.15 | | |||
| Ggtl3 | STRd | Striatum dorsal region | 87.08 | |
| 77.99 | | |||
| Ggtl3 | STRv | Striatum ventral region | 98.37 | |
| 87.77 | | |||
| Ggtl3 | TH | Thalamus | 100 | |
| 100 | |