AutismKB 2.0

Annotation Detail for STAU2


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Basic Information Top
Gene Symbol:STAU2 ( 39K2,39K3,DKFZp781K0371,MGC119606 )
Gene Full Name: staufen, RNA binding protein, homolog 2 (Drosophila)
Band: 8q21.11
Quick LinksEntrez ID:27067; OMIM: 605920; Uniprot ID:STAU2_HUMAN; ENSEMBL ID: ENSG00000040341; HGNC ID: 11371
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body7 / 7076198
blastocyst1 / 6231916
fetus79 / 564012140
neonate4 / 31097128
infant2 / 2362084
juvenile14 / 55556251
adult160 / 193912182
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor1 / 1279478
bladder carcinoma7 / 17475400
breast (mammary gland) tumor5 / 9417853
cervical tumor4 / 34366116
chondrosarcoma8 / 8282396
colorectal tumor5 / 11424643
esophageal tumor6 / 17290347
gastrointestinal tumor7 / 11936958
germ cell tumor39 / 263845147
glioma4 / 10688337
head and neck tumor8 / 13630258
kidney tumor4 / 6895958
leukemia8 / 9584283
liver tumor2 / 9635920
lung tumor1 / 1031279
lymphoma4 / 7175555
non-neoplasia4 / 9725041
normal403 / 3360307119
ovarian tumor2 / 7668226
pancreatic tumor9 / 10461686
primitive neuroectodermal tumor of the CNS12 / 12568095
prostate cancer7 / 10268068
retinoblastoma6 / 46356129
skin tumor8 / 12494964
soft tissue/muscle tissue tumor11 / 12519187
uterine tumor7 / 9025777
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland4 / 33197120
ascites1 / 4001524
bladder7 / 29757235
blood8 / 12347864
bone9 / 71655125
bone marrow7 / 48801143
brain182 / 1100989165
cervix4 / 4817183
connective tissue14 / 14925593
ear0 / 162120 
embryonic tissue16 / 21572274
esophagus6 / 20209296
eye17 / 21105480
heart11 / 89626122
intestine13 / 23447255
kidney18 / 21177784
larynx2 / 2414582
liver9 / 20774343
lung17 / 33697450
lymph4 / 4427090
lymph node6 / 9161065
mammary gland15 / 15327197
mouth7 / 67052104
muscle19 / 107715176
nerve4 / 15768253
ovary3 / 10205129
pancreas14 / 21481265
parathyroid3 / 20539146
pharynx3 / 4132872
pituitary gland1 / 1658560
placenta27 / 28082596
prostate18 / 18934595
salivary gland1 / 2015549
skin13 / 21057461
spleen5 / 5395292
stomach14 / 96619144
testis46 / 330442139
thymus7 / 8113186
thyroid2 / 4747342
tonsil0 / 169990 
trachea7 / 52413133
umbilical cord2 / 13680146
uterus23 / 23287898
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 204226_at
Cell line Expression level Expression bar
721_B_lymphoblasts13.6
Adipocyte8.9
AdrenalCortex10.5
Adrenalgland8.25
Amygdala25.4
Appendix10.1
AtrioventricularNode8
BDCA4+_DentriticCells10.9
Bonemarrow9.65
BronchialEpithelialCells8.6
CD105+_Endothelial9.2
CD14+_Monocytes9.25
CD19+_BCells(neg._sel.)7.6
CD33+_Myeloid11.35
CD34+17.1
CD4+_Tcells9.35
CD56+_NKCells18.6
CD71+_EarlyErythroid8.2
CD8+_Tcells12.8
CardiacMyocytes12.95
Caudatenucleus10.25
Cerebellum8.3
CerebellumPeduncles12.2
CiliaryGanglion8.25
CingulateCortex19.55
Colorectaladenocarcinoma8.65
DorsalRootGanglion8.6
FetalThyroid8.75
Fetalbrain18.3
Fetalliver9.9
Fetallung7.5
GlobusPallidus7.85
Heart14.85
Hypothalamus23.35
Kidney7.9
Leukemia_chronicMyelogenousK-5628.55
Leukemia_promyelocytic-HL-608.35
Leukemialymphoblastic(MOLT-4)25.25
Liver12.7
Lung9.2
Lymphnode7.6
Lymphoma_burkitts(Daudi)14.75
Lymphoma_burkitts(Raji)13.3
MedullaOblongata18.9
OccipitalLobe31.7
OlfactoryBulb7
Ovary6.35
Pancreas7.45
PancreaticIslet9.1
ParietalLobe20.15
Pituitary10.4
Placenta8.55
Pons15.55
PrefrontalCortex36.2
Prostate10.3
Salivarygland7.95
SkeletalMuscle13.1
Skin7.6
SmoothMuscle9.55
Spinalcord9.35
SubthalamicNucleus8.95
SuperiorCervicalGanglion14.9
TemporalLobe10.2
Testis7.45
TestisGermCell8.5
TestisIntersitial8.1
TestisLeydigCell8.6
TestisSeminiferousTubule7.4
Thalamus12.6
Thymus7.65
Thyroid11.5
Tongue9.6
Tonsil9.05
Trachea7.45
TrigeminalGanglion11.5
Uterus8.85
UterusCorpus8.5
WholeBlood9.7
Wholebrain28.7
colon9.5
pineal_day14.8
pineal_night12.94
retina11.85
small_intestine8.9
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_4448_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala10.43 ± 0.18
Basal Forebrain10.44 ± 0.27
Basal Part of Pons10.63 ± 0.25
Cerebellar Cortex10.26 ± 0.23
Cerebellar Nuclei10.64 ± 0.32
Claustrum10.77 ± 0.37
Epithalamus9.76 ± 0.51
Frontal Lobe10.41 ± 0.33
Globus Pallidus10.38 ± 0.39
Hypothalamus10.16 ± 0.38
Insula10.2 ± 0.21
Limbic Lobe10.52 ± 0.34
Mesencephalon10.47 ± 0.36
Myelencephalon10.39 ± 0.34
Occipital Lobe10.75 ± 0.3
Parietal Lobe10.57 ± 0.27
Pontine Tegmentum10.44 ± 0.24
Striatum10.24 ± 0.26
Subthalamus10.89 ± 0.04
Temporal Lobe10.38 ± 0.25
Thalamus10.48 ± 0.24
White Matter9.81 ± 0.37
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Stau2CBCerebellum25.02
54.18
Stau2CTXCerebral cortex100
100
Stau2HIPHippocampal region100
100
Stau2HPFHippocampal formation100
100
Stau2HYHypothalamus100
100
Stau2LSXLateral septal complex100
100
Stau2MBMidbrain86.19
100
Stau2MYMedulla67.68
100
Stau2OLFOlfactory bulb99.86
100
Stau2PPons67.67
100
Stau2PALPallidum97.44
100
Stau2RHPRetrohippocampal region100
100
Stau2sAMYStriatum-like amygdalar nuclei100
100
Stau2STRStriatum100
95.62
Stau2STRdStriatum dorsal region96.46
87.21
Stau2STRvStriatum ventral region100
99.71
Stau2THThalamus100
100
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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