Annotation Detail for FOXP1
Basic Information Top
| Gene Symbol: | FOXP1 ( 12CC4,FLJ23741,MGC12942,MGC88572,MGC99551,QRF1,hFKH1B ) |
|---|---|
| Gene Full Name: | forkhead box P1 |
| Band: | 3p13 |
| Quick Links | Entrez ID:27086; OMIM: 605515; Uniprot ID:FOXP1_HUMAN; ENSEMBL ID: ENSG00000114861; HGNC ID: 3823 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.431498
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 3 / 70761 | 42 |  |
| blastocyst | 1 / 62319 | 16 | |
| fetus | 70 / 564012 | 124 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 133 / 1939121 | 68 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 1 / 17475 | 57 | |
| breast (mammary gland) tumor | 8 / 94178 | 84 | |
| cervical tumor | 1 / 34366 | 29 | |
| chondrosarcoma | 9 / 82823 | 108 | |
| colorectal tumor | 12 / 114246 | 105 | |
| esophageal tumor | 1 / 17290 | 57 | |
| gastrointestinal tumor | 8 / 119369 | 67 | |
| germ cell tumor | 7 / 263845 | 26 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 15 / 136302 | 110 | |
| kidney tumor | 2 / 68959 | 29 | |
| leukemia | 15 / 95842 | 156 | |
| liver tumor | 3 / 96359 | 31 | |
| lung tumor | 7 / 103127 | 67 | |
| lymphoma | 4 / 71755 | 55 | |
| non-neoplasia | 7 / 97250 | 71 | |
| normal | 236 / 3360307 | 70 | |
| ovarian tumor | 2 / 76682 | 26 | |
| pancreatic tumor | 11 / 104616 | 105 | |
| primitive neuroectodermal tumor of the CNS | 2 / 125680 | 15 | |
| prostate cancer | 5 / 102680 | 48 | |
| retinoblastoma | 1 / 46356 | 21 | |
| skin tumor | 1 / 124949 | 8 |  |
| soft tissue/muscle tissue tumor | 4 / 125191 | 31 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 1 / 13106 | 76 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 3 / 40015 | 74 | |
| bladder | 2 / 29757 | 67 | |
| blood | 15 / 123478 | 121 | |
| bone | 5 / 71655 | 69 | |
| bone marrow | 4 / 48801 | 81 | |
| brain | 51 / 1100989 | 46 | |
| cervix | 2 / 48171 | 41 | |
| connective tissue | 17 / 149255 | 113 | |
| ear | 1 / 16212 | 61 | |
| embryonic tissue | 12 / 215722 | 55 | |
| esophagus | 2 / 20209 | 98 | |
| eye | 16 / 211054 | 75 | |
| heart | 7 / 89626 | 78 | |
| intestine | 21 / 234472 | 89 | |
| kidney | 7 / 211777 | 33 | |
| larynx | 4 / 24145 | 165 | |
| liver | 7 / 207743 | 33 | |
| lung | 26 / 336974 | 77 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 28 / 91610 | 305 |  |
| mammary gland | 14 / 153271 | 91 | |
| mouth | 6 / 67052 | 89 | |
| muscle | 5 / 107715 | 46 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 2 / 102051 | 19 | |
| pancreas | 16 / 214812 | 74 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 8 / 41328 | 193 | |
| pituitary gland | 4 / 16585 | 241 | |
| placenta | 2 / 280825 | 7 | |
| prostate | 19 / 189345 | 100 | |
| salivary gland | 1 / 20155 | 49 | |
| skin | 6 / 210574 | 28 | |
| spleen | 5 / 53952 | 92 | |
| stomach | 7 / 96619 | 72 | |
| testis | 8 / 330442 | 24 | |
| thymus | 7 / 81131 | 86 | |
| thyroid | 2 / 47473 | 42 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 3 / 52413 | 57 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 5 / 232878 | 21 | |
| vascular | 10 / 51780 | 193 | |
Microarray in - Probe name: A_23_P155257
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 10.47 ± 0.39 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 10.72 ± 0.39 | |
| Basal Part of Pons | 10.47 ± 0.2 | |
| Cerebellar Cortex | 10.36 ± 0.17 | |
| Cerebellar Nuclei | 10.44 ± 0.26 | |
| Claustrum | 10.88 ± 0.41 | |
| Epithalamus | 10.75 ± 0.46 | |
| Frontal Lobe | 10.75 ± 0.36 | |
| Globus Pallidus | 10.22 ± 0.62 | |
| Hypothalamus | 10.28 ± 0.63 | |
| Insula | 11.02 ± 0.14 | |
| Limbic Lobe | 10.76 ± 0.56 | |
| Mesencephalon | 10.84 ± 0.32 | |
| Myelencephalon | 10.82 ± 0.48 | |
| Occipital Lobe | 11.14 ± 0.36 | |
| Parietal Lobe | 10.87 ± 0.32 | |
| Pontine Tegmentum | 10.78 ± 0.48 | |
| Striatum | 11.94 ± 0.35 | |
| Subthalamus | 10.95 ± 0.11 | |
| Temporal Lobe | 10.95 ± 0.26 | |
| Thalamus | 10.8 ± 0.37 | |
| White Matter | 10.56 ± 0.28 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Foxp1 | CB | Cerebellum | 24.65 | |
| 39.01 | | |||
| Foxp1 | CTX | Cerebral cortex | 60.4 | |
| 49.11 | | |||
| Foxp1 | HIP | Hippocampal region | 36.91 | |
| 54.4 | | |||
| Foxp1 | HPF | Hippocampal formation | 34.71 | |
| 40.82 | | |||
| Foxp1 | HY | Hypothalamus | 7.52 | |
| 6.18 | | |||
| Foxp1 | LSX | Lateral septal complex | 13.05 | |
| 9.93 | | |||
| Foxp1 | MB | Midbrain | 9.64 | |
| 9.89 | | |||
| Foxp1 | MY | Medulla | 17.5 | |
| 20.44 | | |||
| Foxp1 | OLF | Olfactory bulb | 12.22 | |
| 9.73 | | |||
| Foxp1 | P | Pons | 8.72 | |
| 8.2 | | |||
| Foxp1 | PAL | Pallidum | 11.08 | |
| 11.03 | | |||
| Foxp1 | RHP | Retrohippocampal region | 32.05 | |
| 27.51 | | |||
| Foxp1 | sAMY | Striatum-like amygdalar nuclei | 13.5 | |
| 11.3 | | |||
| Foxp1 | STR | Striatum | 100 | |
| 100 | | |||
| Foxp1 | STRd | Striatum dorsal region | 100 | |
| 100 | | |||
| Foxp1 | STRv | Striatum ventral region | 100 | |
| 100 | | |||
| Foxp1 | TH | Thalamus | 26.5 | |
| 24.94 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00040167 | 21 | 289 | 309 | ESLSHEEHPHSHPLYGHGVCK | Peptide Atlas |