Annotation Detail for PPPDE2


Gene Symbol: | PPPDE2 ( D15Wsu75e,DJ347H13.4,FAM152B,MGC138384 ) |
---|---|
Gene Full Name: | PPPDE peptidase domain containing 2 |
Band: | 22q13.2 |
Quick Links | Entrez ID:27351; OMIM: NA; Uniprot ID:PPDE2_HUMAN; ENSEMBL ID: ENSG00000100418; HGNC ID: |
Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.570455
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
![]() | |||
embryoid body | 1 / 70761 | 14 | ![]() |
blastocyst | 2 / 62319 | 32 | ![]() |
fetus | 11 / 564012 | 19 | ![]() |
neonate | 0 / 31097 | 0 | |
infant | 0 / 23620 | 0 | |
juvenile | 2 / 55556 | 35 | ![]() |
adult | 62 / 1939121 | 31 | ![]() |
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
![]() | |||
adrenal tumor | 1 / 12794 | 78 | ![]() |
bladder carcinoma | 0 / 17475 | 0 | |
breast (mammary gland) tumor | 3 / 94178 | 31 | ![]() |
cervical tumor | 0 / 34366 | 0 | |
chondrosarcoma | 2 / 82823 | 24 | ![]() |
colorectal tumor | 5 / 114246 | 43 | ![]() |
esophageal tumor | 0 / 17290 | 0 | |
gastrointestinal tumor | 4 / 119369 | 33 | ![]() |
germ cell tumor | 9 / 263845 | 34 | ![]() |
glioma | 2 / 106883 | 18 | ![]() |
head and neck tumor | 4 / 136302 | 29 | ![]() |
kidney tumor | 2 / 68959 | 29 | ![]() |
leukemia | 1 / 95842 | 10 | ![]() |
liver tumor | 1 / 96359 | 10 | ![]() |
lung tumor | 2 / 103127 | 19 | ![]() |
lymphoma | 5 / 71755 | 69 | ![]() |
non-neoplasia | 0 / 97250 | 0 | |
normal | 71 / 3360307 | 21 | ![]() |
ovarian tumor | 1 / 76682 | 13 | ![]() |
pancreatic tumor | 2 / 104616 | 19 | ![]() |
primitive neuroectodermal tumor of the CNS | 1 / 125680 | 7 | ![]() |
prostate cancer | 5 / 102680 | 48 | ![]() |
retinoblastoma | 2 / 46356 | 43 | ![]() |
skin tumor | 6 / 124949 | 48 | ![]() |
soft tissue/muscle tissue tumor | 3 / 125191 | 23 | ![]() |
uterine tumor | 0 / 90257 | 0 |
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
![]() | |||
adipose tissue | 0 / 13106 | 0 | |
adrenal gland | 1 / 33197 | 30 | ![]() |
ascites | 1 / 40015 | 24 | ![]() |
bladder | 0 / 29757 | 0 | |
blood | 0 / 123478 | 0 | |
bone | 3 / 71655 | 41 | ![]() |
bone marrow | 0 / 48801 | 0 | |
brain | 5 / 1100989 | 4 | ![]() |
cervix | 4 / 48171 | 83 | ![]() |
connective tissue | 0 / 149255 | 0 | |
ear | 0 / 16212 | 0 | |
embryonic tissue | 4 / 215722 | 18 | ![]() |
esophagus | 0 / 20209 | 0 | |
eye | 3 / 211054 | 14 | ![]() |
heart | 4 / 89626 | 44 | ![]() |
intestine | 12 / 234472 | 51 | ![]() |
kidney | 13 / 211777 | 61 | ![]() |
larynx | 0 / 24145 | 0 | |
liver | 3 / 207743 | 14 | ![]() |
lung | 8 / 336974 | 23 | ![]() |
lymph | 4 / 44270 | 90 | ![]() |
lymph node | 3 / 91610 | 32 | ![]() |
mammary gland | 3 / 153271 | 19 | ![]() |
mouth | 1 / 67052 | 14 | ![]() |
muscle | 3 / 107715 | 27 | ![]() |
nerve | 1 / 15768 | 63 | ![]() |
ovary | 1 / 102051 | 9 | ![]() |
pancreas | 2 / 214812 | 9 | ![]() |
parathyroid | 0 / 20539 | 0 | |
pharynx | 2 / 41328 | 48 | ![]() |
pituitary gland | 0 / 16585 | 0 | |
placenta | 18 / 280825 | 64 | ![]() |
prostate | 7 / 189345 | 36 | ![]() |
salivary gland | 0 / 20155 | 0 | |
skin | 6 / 210574 | 28 | ![]() |
spleen | 1 / 53952 | 18 | ![]() |
stomach | 4 / 96619 | 41 | ![]() |
testis | 4 / 330442 | 12 | ![]() |
thymus | 0 / 81131 | 0 | |
thyroid | 1 / 47473 | 21 | ![]() |
tonsil | 1 / 16999 | 58 | ![]() |
trachea | 0 / 52413 | 0 | |
umbilical cord | 0 / 13680 | 0 | |
uterus | 2 / 232878 | 8 | ![]() |
vascular | 1 / 51780 | 19 | ![]() |
- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 212527_at
Cell line | Expression level | Expression bar |
---|---|---|
![]() | ||
721_B_lymphoblasts | 186.5 | ![]() |
Adipocyte | 12.05 | ![]() |
AdrenalCortex | 7.1 | ![]() |
Adrenalgland | 10.5 | ![]() |
Amygdala | 7.65 | ![]() |
Appendix | 10.45 | ![]() |
AtrioventricularNode | 5.95 | ![]() |
BDCA4+_DentriticCells | 9.5 | ![]() |
Bonemarrow | 9.5 | ![]() |
BronchialEpithelialCells | 74.5 | ![]() |
CD105+_Endothelial | 5.5 | ![]() |
CD14+_Monocytes | 9.3 | ![]() |
CD19+_BCells(neg._sel.) | 7.55 | ![]() |
CD33+_Myeloid | 14.05 | ![]() |
CD34+ | 5.25 | ![]() |
CD4+_Tcells | 7.3 | ![]() |
CD56+_NKCells | 6.75 | ![]() |
CD71+_EarlyErythroid | 9.4 | ![]() |
CD8+_Tcells | 6.4 | ![]() |
CardiacMyocytes | 10.3 | ![]() |
Caudatenucleus | 7.9 | ![]() |
Cerebellum | 6.45 | ![]() |
CerebellumPeduncles | 6.95 | ![]() |
CiliaryGanglion | 5.35 | ![]() |
CingulateCortex | 7.25 | ![]() |
Colorectaladenocarcinoma | 7.15 | ![]() |
DorsalRootGanglion | 5.9 | ![]() |
FetalThyroid | 7.05 | ![]() |
Fetalbrain | 6.6 | ![]() |
Fetalliver | 9.35 | ![]() |
Fetallung | 6.9 | ![]() |
GlobusPallidus | 4.5 | ![]() |
Heart | 74.5 | ![]() |
Hypothalamus | 6.9 | ![]() |
Kidney | 11.85 | ![]() |
Leukemia_chronicMyelogenousK-562 | 8 | ![]() |
Leukemia_promyelocytic-HL-60 | 34.45 | ![]() |
Leukemialymphoblastic(MOLT-4) | 5.7 | ![]() |
Liver | 164.6 | ![]() |
Lung | 55.15 | ![]() |
Lymphnode | 5.75 | ![]() |
Lymphoma_burkitts(Daudi) | 41.15 | ![]() |
Lymphoma_burkitts(Raji) | 89.95 | ![]() |
MedullaOblongata | 10 | ![]() |
OccipitalLobe | 7 | ![]() |
OlfactoryBulb | 5.2 | ![]() |
Ovary | 5.05 | ![]() |
Pancreas | 6.2 | ![]() |
PancreaticIslet | 8.5 | ![]() |
ParietalLobe | 7.8 | ![]() |
Pituitary | 9.3 | ![]() |
Placenta | 8.85 | ![]() |
Pons | 7.6 | ![]() |
PrefrontalCortex | 7.4 | ![]() |
Prostate | 10.8 | ![]() |
Salivarygland | 7.4 | ![]() |
SkeletalMuscle | 9.55 | ![]() |
Skin | 6.05 | ![]() |
SmoothMuscle | 21.35 | ![]() |
Spinalcord | 7.45 | ![]() |
SubthalamicNucleus | 5.7 | ![]() |
SuperiorCervicalGanglion | 16.15 | ![]() |
TemporalLobe | 7.3 | ![]() |
Testis | 109.45 | ![]() |
TestisGermCell | 95.25 | ![]() |
TestisIntersitial | 91.3 | ![]() |
TestisLeydigCell | 63.5 | ![]() |
TestisSeminiferousTubule | 73.2 | ![]() |
Thalamus | 8.1 | ![]() |
Thymus | 10.25 | ![]() |
Thyroid | 8.85 | ![]() |
Tongue | 7.75 | ![]() |
Tonsil | 7.8 | ![]() |
Trachea | 6.1 | ![]() |
TrigeminalGanglion | 7.75 | ![]() |
Uterus | 5.35 | ![]() |
UterusCorpus | 8 | ![]() |
WholeBlood | 19 | ![]() |
Wholebrain | 9.8 | ![]() |
colon | 7.85 | ![]() |
pineal_day | 7.2 | ![]() |
pineal_night | 8.22 | ![]() |
retina | 8.55 | ![]() |
small_intestine | 7.85 | ![]() |
- Probe name: CUST_10129_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue | Expression(mean ± stddev) | Expression Bar |
---|---|---|
Amygdala | 6.05 ± 0.35 | ![]() ![]() ![]() |
Basal Forebrain | 6.28 ± 0.26 | ![]() ![]() ![]() |
Basal Part of Pons | 6.39 ± 0.27 | ![]() ![]() ![]() |
Cerebellar Cortex | 6.02 ± 0.22 | ![]() ![]() ![]() |
Cerebellar Nuclei | 6.55 ± 0.3 | ![]() ![]() ![]() |
Claustrum | 6.03 ± 0.48 | ![]() ![]() ![]() |
Epithalamus | 6.02 ± 0.43 | ![]() ![]() ![]() |
Frontal Lobe | 6.31 ± 0.3 | ![]() ![]() ![]() |
Globus Pallidus | 6.6 ± 0.24 | ![]() ![]() ![]() |
Hypothalamus | 6.1 ± 0.25 | ![]() ![]() ![]() |
Insula | 6.19 ± 0.41 | ![]() ![]() ![]() |
Limbic Lobe | 6.28 ± 0.31 | ![]() ![]() ![]() |
Mesencephalon | 6.25 ± 0.34 | ![]() ![]() ![]() |
Myelencephalon | 6.28 ± 0.35 | ![]() ![]() ![]() |
Occipital Lobe | 6.41 ± 0.29 | ![]() ![]() ![]() |
Parietal Lobe | 6.3 ± 0.32 | ![]() ![]() ![]() |
Pontine Tegmentum | 6.3 ± 0.39 | ![]() ![]() ![]() |
Striatum | 6.6 ± 0.25 | ![]() ![]() ![]() |
Subthalamus | 6.27 ± 0.6 | ![]() ![]() ![]() |
Temporal Lobe | 6.25 ± 0.28 | ![]() ![]() ![]() |
Thalamus | 6.37 ± 0.27 | ![]() ![]() ![]() |
White Matter | 6.61 ± 0.05 | ![]() ![]() ![]() |
Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
---|---|---|---|---|
D15Wsu75e | CB | Cerebellum | 77.39 | ![]() |
100 | ![]() | |||
D15Wsu75e | CTX | Cerebral cortex | 100 | ![]() |
90.8 | ![]() | |||
D15Wsu75e | HIP | Hippocampal region | 87.71 | ![]() |
100 | ![]() | |||
D15Wsu75e | HPF | Hippocampal formation | 90.3 | ![]() |
100 | ![]() | |||
D15Wsu75e | HY | Hypothalamus | 80.8 | ![]() |
66.28 | ![]() | |||
D15Wsu75e | LSX | Lateral septal complex | 59.35 | ![]() |
45.5 | ![]() | |||
D15Wsu75e | MB | Midbrain | 100 | ![]() |
96.64 | ![]() | |||
D15Wsu75e | MY | Medulla | 84.35 | ![]() |
90.76 | ![]() | |||
D15Wsu75e | OLF | Olfactory bulb | 97.04 | ![]() |
100 | ![]() | |||
D15Wsu75e | P | Pons | 94.25 | ![]() |
93.06 | ![]() | |||
D15Wsu75e | PAL | Pallidum | 83.14 | ![]() |
72.03 | ![]() | |||
D15Wsu75e | RHP | Retrohippocampal region | 92.46 | ![]() |
83.42 | ![]() | |||
D15Wsu75e | sAMY | Striatum-like amygdalar nuclei | 57.37 | ![]() |
42.83 | ![]() | |||
D15Wsu75e | STR | Striatum | 71.69 | ![]() |
56.2 | ![]() | |||
D15Wsu75e | STRd | Striatum dorsal region | 77.79 | ![]() |
63.13 | ![]() | |||
D15Wsu75e | STRv | Striatum ventral region | 65.89 | ![]() |
46.86 | ![]() | |||
D15Wsu75e | TH | Thalamus | 100 | ![]() |
100 | ![]() |
Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
---|---|---|---|---|---|
PAp00095945 | 25 | 98 | 122 | GEAYNLFEHNCNTFSNEVAQFLTGR | Peptide Atlas |