AutismKB 2.0

Annotation Detail for SSX7


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Basic Information Top
Gene Symbol:SSX7 ( - )
Gene Full Name: synovial sarcoma, X breakpoint 7
Band: Xp11.22
Quick LinksEntrez ID:280658; OMIM: 300542; Uniprot ID:SSX7_HUMAN; ENSEMBL ID: ENSG00000187754; HGNC ID: 19653
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Microarray in BioGPS Top
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  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 216471_x_at
Cell line Expression level Expression bar
721_B_lymphoblasts13.85
Adipocyte6.65
AdrenalCortex6.35
Adrenalgland5.1
Amygdala7.05
Appendix6.2
AtrioventricularNode4.7
BDCA4+_DentriticCells5.4
Bonemarrow6.85
BronchialEpithelialCells6.2
CD105+_Endothelial6.15
CD14+_Monocytes5.5
CD19+_BCells(neg._sel.)6.3
CD33+_Myeloid7.45
CD34+6.95
CD4+_Tcells6.4
CD56+_NKCells7.2
CD71+_EarlyErythroid5.8
CD8+_Tcells5.85
CardiacMyocytes7.9
Caudatenucleus5.35
Cerebellum4.95
CerebellumPeduncles6.85
CiliaryGanglion4.3
CingulateCortex6.25
Colorectaladenocarcinoma6.05
DorsalRootGanglion4.8
FetalThyroid5.9
Fetalbrain6.2
Fetalliver5.35
Fetallung5.2
GlobusPallidus4.45
Heart8.7
Hypothalamus6.55
Kidney5.1
Leukemia_chronicMyelogenousK-5625.55
Leukemia_promyelocytic-HL-607.05
Leukemialymphoblastic(MOLT-4)4.8
Liver7.9
Lung6.65
Lymphnode5.2
Lymphoma_burkitts(Daudi)21.4
Lymphoma_burkitts(Raji)8.75
MedullaOblongata5.6
OccipitalLobe5.3
OlfactoryBulb4.8
Ovary4.05
Pancreas4.9
PancreaticIslet7.8
ParietalLobe6.5
Pituitary7.2
Placenta7.5
Pons5.75
PrefrontalCortex7.1
Prostate7.2
Salivarygland4.75
SkeletalMuscle21.85
Skin4.6
SmoothMuscle7
Spinalcord6.95
SubthalamicNucleus5.5
SuperiorCervicalGanglion6.8
TemporalLobe5.5
Testis42.5
TestisGermCell139.8
TestisIntersitial157.65
TestisLeydigCell129.95
TestisSeminiferousTubule112.45
Thalamus5.95
Thymus4.75
Thyroid9.6
Tongue6
Tonsil5.95
Trachea5.75
TrigeminalGanglion5.95
Uterus5
UterusCorpus5.75
WholeBlood6.7
Wholebrain5.15
colon6.2
pineal_day7.78
pineal_night7.46
retina7.475
small_intestine5.9
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P374226
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala2.6 ± 0.95
Basal Forebrain2.27 ± 0.17
Basal Part of Pons1.94 ± 0.25
Cerebellar Cortex2.05 ± 0.72
Cerebellar Nuclei2.51 ± 0.7
Claustrum3.09 ± 0.84
Epithalamus1.95 ± 0.75
Frontal Lobe2.05 ± 0.6
Globus Pallidus2.77 ± 0.3
Hypothalamus2.24 ± 0.61
Insula2.12 ± 0.57
Limbic Lobe2.21 ± 0.6
Mesencephalon2.36 ± 0.64
Myelencephalon2.23 ± 0.64
Occipital Lobe2.31 ± 0.64
Parietal Lobe2.19 ± 0.61
Pontine Tegmentum2.26 ± 0.67
Striatum2.44 ± 0.59
Subthalamus2.41 ± 0.67
Temporal Lobe2.09 ± 0.59
Thalamus2.19 ± 0.55
White Matter2.79 ± 0.35
Mouse Brain ISH
Peptide Top

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  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018