Annotation Detail for JAKMIP3
Basic Information Top
| Gene Symbol: | JAKMIP3 ( C10orf14,C10orf39,FLJ37857,FLJ41432,Jamip3,NECC2,bA140A10.5 ) |
|---|---|
| Gene Full Name: | Janus kinase and microtubule interacting protein 3 |
| Band: | 10q26.3 |
| Quick Links | Entrez ID:282973; OMIM: 611198; Uniprot ID:; ENSEMBL ID: ENSG00000188385; HGNC ID: 23523 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.106254
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 1 / 62319 | 16 |  |
| fetus | 1 / 564012 | 1 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 2 / 1939121 | 1 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 0 / 263845 | 0 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 30 / 3360307 | 8 |  |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 1 / 125680 | 7 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 10 / 1100989 | 9 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 1 / 215722 | 4 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 1 / 211054 | 4 | |
| heart | 0 / 89626 | 0 | |
| intestine | 0 / 234472 | 0 | |
| kidney | 0 / 211777 | 0 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 0 / 336974 | 0 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 0 / 153271 | 0 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 0 / 214812 | 0 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 0 / 280825 | 0 | |
| prostate | 1 / 189345 | 5 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 0 / 210574 | 0 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 5 / 330442 | 15 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 0 / 232878 | 0 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_24_P323522
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 9.13 ± 0.36 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 9.07 ± 0.38 | |
| Basal Part of Pons | 8.61 ± 0.41 | |
| Cerebellar Cortex | 8.52 ± 0.23 | |
| Cerebellar Nuclei | 8.67 ± 0.3 | |
| Claustrum | 9.3 ± 0.47 | |
| Epithalamus | 8.13 ± 0.59 | |
| Frontal Lobe | 8.66 ± 0.51 | |
| Globus Pallidus | 10 ± 0.2 | |
| Hypothalamus | 8.58 ± 0.39 | |
| Insula | 8.73 ± 0.33 | |
| Limbic Lobe | 9.03 ± 0.55 | |
| Mesencephalon | 9.1 ± 0.49 | |
| Myelencephalon | 8.83 ± 0.54 | |
| Occipital Lobe | 9.28 ± 0.46 | |
| Parietal Lobe | 8.98 ± 0.44 | |
| Pontine Tegmentum | 8.78 ± 0.44 | |
| Striatum | 8.82 ± 0.47 | |
| Subthalamus | 8.72 ± 0.26 | |
| Temporal Lobe | 8.8 ± 0.43 | |
| Thalamus | 8.69 ± 0.35 | |
| White Matter | 10.8 ± 0.55 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| 6330417G02Rik | CB | Cerebellum | 62.81 |  |
| 76.12 | | |||
| 6330417G02Rik | CTX | Cerebral cortex | 100 | |
| 98.25 | | |||
| 6330417G02Rik | HIP | Hippocampal region | 93.88 | |
| 100 | | |||
| 6330417G02Rik | HPF | Hippocampal formation | 100 | |
| 100 | | |||
| 6330417G02Rik | HY | Hypothalamus | 81.46 | |
| 63.52 | | |||
| 6330417G02Rik | LSX | Lateral septal complex | 100 | |
| 92.26 | | |||
| 6330417G02Rik | MB | Midbrain | 82.42 | |
| 71.34 | | |||
| 6330417G02Rik | MY | Medulla | 79.12 | |
| 75.05 | | |||
| 6330417G02Rik | OLF | Olfactory bulb | 97.26 | |
| 81.59 | | |||
| 6330417G02Rik | P | Pons | 80.78 | |
| 73.42 | | |||
| 6330417G02Rik | PAL | Pallidum | 76.84 | |
| 63.89 | | |||
| 6330417G02Rik | RHP | Retrohippocampal region | 100 | |
| 100 | | |||
| 6330417G02Rik | sAMY | Striatum-like amygdalar nuclei | 100 | |
| 89.62 | | |||
| 6330417G02Rik | STR | Striatum | 100 | |
| 87.62 | | |||
| 6330417G02Rik | STRd | Striatum dorsal region | 100 | |
| 87.86 | | |||
| 6330417G02Rik | STRv | Striatum ventral region | 100 | |
| 85.11 | | |||
| 6330417G02Rik | TH | Thalamus | 80.99 | |
| 69.58 | |