Annotation Detail for BCL9L
Basic Information Top
| Gene Symbol: | BCL9L ( BCL9-2,DLNB11 ) |
|---|---|
| Gene Full Name: | B-cell CLL/lymphoma 9-like |
| Band: | 11q23.3 |
| Quick Links | Entrez ID:283149; OMIM: 609004; Uniprot ID:BCL9L_HUMAN; ENSEMBL ID: ENSG00000186174; HGNC ID: 23688 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.414740
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 9 / 70761 | 127 |  |
| blastocyst | 7 / 62319 | 112 | |
| fetus | 8 / 564012 | 14 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 91 / 1939121 | 46 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 1 / 17475 | 57 | |
| breast (mammary gland) tumor | 4 / 94178 | 42 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 3 / 82823 | 36 | |
| colorectal tumor | 4 / 114246 | 35 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 4 / 119369 | 33 | |
| germ cell tumor | 7 / 263845 | 26 | |
| glioma | 9 / 106883 | 84 | |
| head and neck tumor | 4 / 136302 | 29 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 1 / 95842 | 10 |  |
| liver tumor | 3 / 96359 | 31 | |
| lung tumor | 10 / 103127 | 96 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 1 / 97250 | 10 | |
| normal | 103 / 3360307 | 30 | |
| ovarian tumor | 4 / 76682 | 52 | |
| pancreatic tumor | 16 / 104616 | 152 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 6 / 102680 | 58 | |
| retinoblastoma | 1 / 46356 | 21 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 2 / 125191 | 15 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 1 / 13106 | 76 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 1 / 29757 | 33 | |
| blood | 1 / 123478 | 8 | |
| bone | 5 / 71655 | 69 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 23 / 1100989 | 20 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 2 / 149255 | 13 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 17 / 215722 | 78 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 10 / 211054 | 47 | |
| heart | 1 / 89626 | 11 | |
| intestine | 10 / 234472 | 42 | |
| kidney | 1 / 211777 | 4 | |
| larynx | 2 / 24145 | 82 | |
| liver | 3 / 207743 | 14 | |
| lung | 33 / 336974 | 97 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 1 / 91610 | 10 | |
| mammary gland | 7 / 153271 | 45 | |
| mouth | 3 / 67052 | 44 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 4 / 102051 | 39 | |
| pancreas | 17 / 214812 | 79 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 12 / 280825 | 42 | |
| prostate | 14 / 189345 | 73 | |
| salivary gland | 1 / 20155 | 49 | |
| skin | 0 / 210574 | 0 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 5 / 96619 | 51 | |
| testis | 2 / 330442 | 6 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 3 / 232878 | 12 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_24_P134816
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 4.01 ± 0.58 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 4.27 ± 0.49 | |
| Basal Part of Pons | 3.49 ± 0.48 | |
| Cerebellar Cortex | 4.38 ± 0.34 | |
| Cerebellar Nuclei | 3.73 ± 0.42 | |
| Claustrum | 4.05 ± 0.65 | |
| Epithalamus | 3.79 ± 0.76 | |
| Frontal Lobe | 3.81 ± 0.53 | |
| Globus Pallidus | 3.38 ± 0.67 | |
| Hypothalamus | 3.56 ± 0.44 | |
| Insula | 3.83 ± 0.4 | |
| Limbic Lobe | 3.94 ± 0.61 | |
| Mesencephalon | 3.91 ± 0.58 | |
| Myelencephalon | 3.83 ± 0.56 | |
| Occipital Lobe | 3.95 ± 0.71 | |
| Parietal Lobe | 3.79 ± 0.49 | |
| Pontine Tegmentum | 3.97 ± 0.67 | |
| Striatum | 3.59 ± 0.62 | |
| Subthalamus | 3.46 ± 0.76 | |
| Temporal Lobe | 3.95 ± 0.54 | |
| Thalamus | 3.71 ± 0.56 | |
| White Matter | 2.56 ± 0.96 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Bcl9l | CB | Cerebellum | 11.56 | |
| 11.31 | | |||
| Bcl9l | CTX | Cerebral cortex | 8.55 | |
| 6.51 | | |||
| Bcl9l | HIP | Hippocampal region | 10.99 | |
| 10.51 | | |||
| Bcl9l | HPF | Hippocampal formation | 10.54 | |
| 9.67 | | |||
| Bcl9l | HY | Hypothalamus | 9.25 | |
| 9.84 | | |||
| Bcl9l | LSX | Lateral septal complex | 1.15 | |
| 1.11 | | |||
| Bcl9l | MB | Midbrain | 5.12 | |
| 5.88 | | |||
| Bcl9l | MY | Medulla | 19.59 | |
| 23.26 | | |||
| Bcl9l | OLF | Olfactory bulb | 30.4 | |
| 25.77 | | |||
| Bcl9l | P | Pons | 16.7 | |
| 20.22 | | |||
| Bcl9l | PAL | Pallidum | 9.66 | |
| 8.54 | | |||
| Bcl9l | RHP | Retrohippocampal region | 9.85 | |
| 8.78 | | |||
| Bcl9l | sAMY | Striatum-like amygdalar nuclei | 33.23 | |
| 24.73 | | |||
| Bcl9l | STR | Striatum | 10.68 | |
| 8.23 | | |||
| Bcl9l | STRd | Striatum dorsal region | 5.64 | |
| 4.08 | | |||
| Bcl9l | STRv | Striatum ventral region | 25.61 | |
| 19.55 | | |||
| Bcl9l | TH | Thalamus | 2.75 | |
| 2.7 | |