Annotation Detail for ANKRD52
Basic Information Top
| Gene Symbol: | ANKRD52 ( ANKRD33,FLJ34236 ) |
|---|---|
| Gene Full Name: | ankyrin repeat domain 52 |
| Band: | 12q13.3 |
| Quick Links | Entrez ID:283373; OMIM: NA; Uniprot ID:ANR52_HUMAN; ENSEMBL ID: ENSG00000139645; HGNC ID: 26614 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.524506
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 2 / 70761 | 28 |  |
| blastocyst | 1 / 62319 | 16 | |
| fetus | 16 / 564012 | 28 | |
| neonate | 3 / 31097 | 96 |  |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 62 / 1939121 | 31 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 6 / 94178 | 63 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 5 / 82823 | 60 | |
| colorectal tumor | 5 / 114246 | 43 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 8 / 119369 | 67 | |
| germ cell tumor | 4 / 263845 | 15 | |
| glioma | 3 / 106883 | 28 | |
| head and neck tumor | 5 / 136302 | 36 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 6 / 95842 | 62 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 1 / 103127 | 9 |  |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 1 / 97250 | 10 | |
| normal | 72 / 3360307 | 21 | |
| ovarian tumor | 6 / 76682 | 78 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 2 / 125680 | 15 | |
| prostate cancer | 9 / 102680 | 87 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 3 / 124949 | 24 | |
| soft tissue/muscle tissue tumor | 1 / 125191 | 7 | |
| uterine tumor | 4 / 90257 | 44 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 0 / 29757 | 0 | |
| blood | 2 / 123478 | 16 | |
| bone | 1 / 71655 | 13 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 30 / 1100989 | 27 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 4 / 149255 | 26 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 4 / 215722 | 18 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 12 / 211054 | 56 | |
| heart | 2 / 89626 | 22 | |
| intestine | 14 / 234472 | 59 | |
| kidney | 4 / 211777 | 18 | |
| larynx | 1 / 24145 | 41 | |
| liver | 0 / 207743 | 0 | |
| lung | 5 / 336974 | 14 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 1 / 91610 | 10 | |
| mammary gland | 8 / 153271 | 52 | |
| mouth | 3 / 67052 | 44 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 6 / 102051 | 58 | |
| pancreas | 0 / 214812 | 0 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 0 / 280825 | 0 | |
| prostate | 12 / 189345 | 63 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 3 / 210574 | 14 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 5 / 96619 | 51 | |
| testis | 5 / 330442 | 15 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 1 / 52413 | 19 | |
| umbilical cord | 10 / 13680 | 730 |  |
| uterus | 6 / 232878 | 25 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_24_P172600
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 2.17 ± 0.98 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 2.02 ± 0.4 | |
| Basal Part of Pons | 1.98 ± 0.67 | |
| Cerebellar Cortex | 1.57 ± 0.78 | |
| Cerebellar Nuclei | 2.2 ± 0.7 | |
| Claustrum | 2.49 ± 0.97 | |
| Epithalamus | 1.4 ± 0.71 | |
| Frontal Lobe | 1.85 ± 0.77 | |
| Globus Pallidus | 1.98 ± 0.56 | |
| Hypothalamus | 1.6 ± 0.37 | |
| Insula | 2.03 ± 0.8 | |
| Limbic Lobe | 1.95 ± 0.82 | |
| Mesencephalon | 2 ± 0.87 | |
| Myelencephalon | 1.95 ± 0.77 | |
| Occipital Lobe | 1.93 ± 0.88 | |
| Parietal Lobe | 1.99 ± 0.84 | |
| Pontine Tegmentum | 1.83 ± 0.78 | |
| Striatum | 2.11 ± 0.97 | |
| Subthalamus | 1.65 ± 1.16 | |
| Temporal Lobe | 1.76 ± 0.81 | |
| Thalamus | 2.04 ± 0.64 | |
| White Matter | 2.55 ± 0.75 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Ankrd52 | CB | Cerebellum | 70.7 | |
| 100 | | |||
| Ankrd52 | CTX | Cerebral cortex | 92.62 | |
| 69.73 | | |||
| Ankrd52 | HIP | Hippocampal region | 53.27 | |
| 70.83 | | |||
| Ankrd52 | HPF | Hippocampal formation | 60.28 | |
| 66.05 | | |||
| Ankrd52 | HY | Hypothalamus | 44.25 | |
| 35.14 | | |||
| Ankrd52 | LSX | Lateral septal complex | 56.46 | |
| 42.12 | | |||
| Ankrd52 | MB | Midbrain | 48.1 | |
| 45.36 | | |||
| Ankrd52 | MY | Medulla | 39.98 | |
| 47.22 | | |||
| Ankrd52 | OLF | Olfactory bulb | 91.9 | |
| 82.47 | | |||
| Ankrd52 | P | Pons | 40.52 | |
| 45.36 | | |||
| Ankrd52 | PAL | Pallidum | 43.18 | |
| 39.74 | | |||
| Ankrd52 | RHP | Retrohippocampal region | 74.7 | |
| 61.35 | | |||
| Ankrd52 | sAMY | Striatum-like amygdalar nuclei | 65.27 | |
| 48.51 | | |||
| Ankrd52 | STR | Striatum | 55 | |
| 41.65 | | |||
| Ankrd52 | STRd | Striatum dorsal region | 51.05 | |
| 39.03 | | |||
| Ankrd52 | STRv | Striatum ventral region | 62.73 | |
| 45.19 | | |||
| Ankrd52 | TH | Thalamus | 65.18 | |
| 55.79 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| ANR52_HUMAN_2 | 18 | 2 | 19 | GILSITDQPPLVQAIFSR | PRIDE |
| PAp00005987 | 10 | 926 | 935 | NTALHLACSK | Peptide Atlas |