Annotation Detail for C12orf51
Basic Information Top
| Gene Symbol: | C12orf51 ( DKFZp586O1022,FLJ10510,FLJ30092,FLJ30208,FLJ34154,KIAA0614,MGC126531 ) |
|---|---|
| Gene Full Name: | chromosome 12 open reading frame 51 |
| Band: | 12q24.13 |
| Quick Links | Entrez ID:283450; OMIM: NA; Uniprot ID:; ENSEMBL ID: ENSG00000173064; HGNC ID: |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.530943
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
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| embryoid body | 1 / 70761 | 14 | |
| blastocyst | 1 / 62319 | 16 | |
| fetus | 66 / 564012 | 117 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 3 / 55556 | 53 | |
| adult | 249 / 1939121 | 128 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
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| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 3 / 17475 | 171 | |
| breast (mammary gland) tumor | 7 / 94178 | 74 | |
| cervical tumor | 1 / 34366 | 29 | |
| chondrosarcoma | 9 / 82823 | 108 | |
| colorectal tumor | 3 / 114246 | 26 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 2 / 119369 | 16 | |
| germ cell tumor | 9 / 263845 | 34 | |
| glioma | 7 / 106883 | 65 | |
| head and neck tumor | 10 / 136302 | 73 | |
| kidney tumor | 4 / 68959 | 58 | |
| leukemia | 8 / 95842 | 83 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 7 / 103127 | 67 | |
| lymphoma | 4 / 71755 | 55 | |
| non-neoplasia | 1 / 97250 | 10 | |
| normal | 319 / 3360307 | 94 | |
| ovarian tumor | 4 / 76682 | 52 | |
| pancreatic tumor | 5 / 104616 | 47 | |
| primitive neuroectodermal tumor of the CNS | 7 / 125680 | 55 | |
| prostate cancer | 4 / 102680 | 38 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 1 / 124949 | 8 | |
| soft tissue/muscle tissue tumor | 5 / 125191 | 39 | |
| uterine tumor | 6 / 90257 | 66 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
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| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 4 / 29757 | 134 | |
| blood | 9 / 123478 | 72 | |
| bone | 4 / 71655 | 55 | |
| bone marrow | 3 / 48801 | 61 | |
| brain | 153 / 1100989 | 138 | |
| cervix | 1 / 48171 | 20 | |
| connective tissue | 13 / 149255 | 87 | |
| ear | 2 / 16212 | 123 | |
| embryonic tissue | 5 / 215722 | 23 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 20 / 211054 | 94 | |
| heart | 7 / 89626 | 78 | |
| intestine | 6 / 234472 | 25 | |
| kidney | 8 / 211777 | 37 | |
| larynx | 4 / 24145 | 165 | |
| liver | 2 / 207743 | 9 | |
| lung | 32 / 336974 | 94 | |
| lymph | 3 / 44270 | 67 | |
| lymph node | 16 / 91610 | 174 | |
| mammary gland | 13 / 153271 | 84 | |
| mouth | 4 / 67052 | 59 | |
| muscle | 3 / 107715 | 27 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 5 / 102051 | 48 | |
| pancreas | 15 / 214812 | 69 | |
| parathyroid | 2 / 20539 | 97 | |
| pharynx | 3 / 41328 | 72 | |
| pituitary gland | 2 / 16585 | 120 | |
| placenta | 11 / 280825 | 39 | |
| prostate | 13 / 189345 | 68 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 2 / 210574 | 9 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 3 / 96619 | 31 | |
| testis | 10 / 330442 | 30 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 2 / 47473 | 42 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 12 / 232878 | 51 | |
| vascular | 1 / 51780 | 19 |
- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 211034_s_at
| Cell line | Expression level | Expression bar |
|---|---|---|
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| 721_B_lymphoblasts | 28.15 | |
| Adipocyte | 17.85 | |
| AdrenalCortex | 21.3 | |
| Adrenalgland | 15.6 | |
| Amygdala | 71.6 | |
| Appendix | 37 | |
| AtrioventricularNode | 15.25 | |
| BDCA4+_DentriticCells | 42 | |
| Bonemarrow | 30.5 | |
| BronchialEpithelialCells | 10.6 | |
| CD105+_Endothelial | 49.55 | |
| CD14+_Monocytes | 28.75 | |
| CD19+_BCells(neg._sel.) | 108.3 | |
| CD33+_Myeloid | 41.25 | |
| CD34+ | 65.4 | |
| CD4+_Tcells | 61.95 | |
| CD56+_NKCells | 35.8 | |
| CD71+_EarlyErythroid | 442 | |
| CD8+_Tcells | 94 | |
| CardiacMyocytes | 24.7 | |
| Caudatenucleus | 51.35 | |
| Cerebellum | 134.15 | |
| CerebellumPeduncles | 109.9 | |
| CiliaryGanglion | 15.4 | |
| CingulateCortex | 81.55 | |
| Colorectaladenocarcinoma | 19.6 | |
| DorsalRootGanglion | 17.1 | |
| FetalThyroid | 57.55 | |
| Fetalbrain | 287 | |
| Fetalliver | 41.55 | |
| Fetallung | 29.8 | |
| GlobusPallidus | 19.8 | |
| Heart | 25.05 | |
| Hypothalamus | 236.25 | |
| Kidney | 15.9 | |
| Leukemia_chronicMyelogenousK-562 | 24.95 | |
| Leukemia_promyelocytic-HL-60 | 24.95 | |
| Leukemialymphoblastic(MOLT-4) | 22.25 | |
| Liver | 21.35 | |
| Lung | 37.45 | |
| Lymphnode | 22.85 | |
| Lymphoma_burkitts(Daudi) | 26.75 | |
| Lymphoma_burkitts(Raji) | 29.05 | |
| MedullaOblongata | 79.2 | |
| OccipitalLobe | 85.9 | |
| OlfactoryBulb | 18.3 | |
| Ovary | 12.65 | |
| Pancreas | 16.9 | |
| PancreaticIslet | 22.25 | |
| ParietalLobe | 52.55 | |
| Pituitary | 29.55 | |
| Placenta | 20 | |
| Pons | 45.1 | |
| PrefrontalCortex | 205.05 | |
| Prostate | 29.7 | |
| Salivarygland | 19.7 | |
| SkeletalMuscle | 25 | |
| Skin | 14.65 | |
| SmoothMuscle | 17.25 | |
| Spinalcord | 77.95 | |
| SubthalamicNucleus | 94.3 | |
| SuperiorCervicalGanglion | 24.7 | |
| TemporalLobe | 44.85 | |
| Testis | 32.8 | |
| TestisGermCell | 33.4 | |
| TestisIntersitial | 18.95 | |
| TestisLeydigCell | 23.05 | |
| TestisSeminiferousTubule | 21.1 | |
| Thalamus | 120.8 | |
| Thymus | 18.1 | |
| Thyroid | 33 | |
| Tongue | 20 | |
| Tonsil | 19.1 | |
| Trachea | 16.2 | |
| TrigeminalGanglion | 23.35 | |
| Uterus | 21.5 | |
| UterusCorpus | 18.55 | |
| WholeBlood | 23.2 | |
| Wholebrain | 76.9 | |
| colon | 23 | |
| pineal_day | 175.72 | |
| pineal_night | 150.84 | |
| retina | 44.825 | |
| small_intestine | 17.05 |
- Probe name: A_23_P162702
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 8.78 ± 0.57 | |
| Basal Forebrain | 8.94 ± 0.25 | |
| Basal Part of Pons | 9.54 ± 0.31 | |
| Cerebellar Cortex | 9.59 ± 0.14 | |
| Cerebellar Nuclei | 9.25 ± 0.27 | |
| Claustrum | 9.21 ± 0.32 | |
| Epithalamus | 8.71 ± 0.43 | |
| Frontal Lobe | 9.33 ± 0.3 | |
| Globus Pallidus | 8.28 ± 0.44 | |
| Hypothalamus | 9.46 ± 0.32 | |
| Insula | 9.4 ± 0.3 | |
| Limbic Lobe | 9.18 ± 0.48 | |
| Mesencephalon | 9.1 ± 0.43 | |
| Myelencephalon | 9.09 ± 0.5 | |
| Occipital Lobe | 8.81 ± 0.6 | |
| Parietal Lobe | 9.17 ± 0.38 | |
| Pontine Tegmentum | 9.12 ± 0.39 | |
| Striatum | 8.62 ± 0.45 | |
| Subthalamus | 9.37 ± 0.31 | |
| Temporal Lobe | 9.33 ± 0.35 | |
| Thalamus | 9.11 ± 0.36 | |
| White Matter | 8.72 ± 0.51 |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00027629 | 18 | 3258 | 3275 | SCAHSEQTLSLTPAKPIR | Peptide Atlas |




Mouse Brain ISH