Annotation Detail for FAM98B
Basic Information Top
| Gene Symbol: | FAM98B ( FLJ38426 ) |
|---|---|
| Gene Full Name: | family with sequence similarity 98, member B |
| Band: | 15q14 |
| Quick Links | Entrez ID:283742; OMIM: NA; Uniprot ID:FA98B_HUMAN; ENSEMBL ID: ENSG00000171262; HGNC ID: 26773 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.6799
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 3 / 70761 | 42 |  |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 16 / 564012 | 28 | |
| neonate | 1 / 31097 | 32 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 2 / 55556 | 35 | |
| adult | 54 / 1939121 | 27 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 5 / 82823 | 60 |  |
| colorectal tumor | 1 / 114246 | 8 |  |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 1 / 119369 | 8 | |
| germ cell tumor | 10 / 263845 | 37 | |
| glioma | 6 / 106883 | 56 | |
| head and neck tumor | 1 / 136302 | 7 | |
| kidney tumor | 3 / 68959 | 43 | |
| leukemia | 6 / 95842 | 62 | |
| liver tumor | 3 / 96359 | 31 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 2 / 97250 | 20 | |
| normal | 96 / 3360307 | 28 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 1 / 125680 | 7 | |
| prostate cancer | 5 / 102680 | 48 | |
| retinoblastoma | 2 / 46356 | 43 | |
| skin tumor | 1 / 124949 | 8 | |
| soft tissue/muscle tissue tumor | 3 / 125191 | 23 | |
| uterine tumor | 4 / 90257 | 44 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 1 / 29757 | 33 | |
| blood | 5 / 123478 | 40 | |
| bone | 7 / 71655 | 97 | |
| bone marrow | 2 / 48801 | 40 | |
| brain | 25 / 1100989 | 22 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 1 / 149255 | 6 | |
| ear | 4 / 16212 | 246 |  |
| embryonic tissue | 9 / 215722 | 41 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 4 / 211054 | 18 | |
| heart | 3 / 89626 | 33 | |
| intestine | 3 / 234472 | 12 | |
| kidney | 13 / 211777 | 61 | |
| larynx | 0 / 24145 | 0 | |
| liver | 5 / 207743 | 24 | |
| lung | 9 / 336974 | 26 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 4 / 91610 | 43 | |
| mammary gland | 6 / 153271 | 39 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 3 / 214812 | 13 | |
| parathyroid | 3 / 20539 | 146 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 6 / 280825 | 21 | |
| prostate | 9 / 189345 | 47 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 2 / 210574 | 9 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 1 / 96619 | 10 | |
| testis | 7 / 330442 | 21 | |
| thymus | 2 / 81131 | 24 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 1 / 13680 | 73 | |
| uterus | 6 / 232878 | 25 | |
| vascular | 1 / 51780 | 19 | |
Microarray in - Probe name: CUST_585_PI416379584
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 8.42 ± 0.17 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 8.46 ± 0.18 | |
| Basal Part of Pons | 8.56 ± 0.19 | |
| Cerebellar Cortex | 8.8 ± 0.11 | |
| Cerebellar Nuclei | 8.39 ± 0.25 | |
| Claustrum | 8.52 ± 0.27 | |
| Epithalamus | 8.69 ± 0.35 | |
| Frontal Lobe | 8.6 ± 0.25 | |
| Globus Pallidus | 8.2 ± 0.12 | |
| Hypothalamus | 8.58 ± 0.29 | |
| Insula | 8.63 ± 0.21 | |
| Limbic Lobe | 8.57 ± 0.25 | |
| Mesencephalon | 8.58 ± 0.27 | |
| Myelencephalon | 8.55 ± 0.26 | |
| Occipital Lobe | 8.73 ± 0.22 | |
| Parietal Lobe | 8.67 ± 0.2 | |
| Pontine Tegmentum | 8.54 ± 0.23 | |
| Striatum | 8.23 ± 0.22 | |
| Subthalamus | 8.84 ± 0.11 | |
| Temporal Lobe | 8.62 ± 0.19 | |
| Thalamus | 8.5 ± 0.24 | |
| White Matter | 8.64 ± 0.14 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| 2610510H03Rik | CB | Cerebellum | 8.79 | |
| 10.14 | | |||
| 2610510H03Rik | CTX | Cerebral cortex | 12.38 | |
| 10.03 | | |||
| 2610510H03Rik | HIP | Hippocampal region | 10.51 | |
| 12.6 | | |||
| 2610510H03Rik | HPF | Hippocampal formation | 7.49 | |
| 8.28 | | |||
| 2610510H03Rik | HY | Hypothalamus | 6.24 | |
| 5.61 | | |||
| 2610510H03Rik | LSX | Lateral septal complex | 2.82 | |
| 2.01 | | |||
| 2610510H03Rik | MB | Midbrain | 1.38 | |
| 1.82 | | |||
| 2610510H03Rik | MY | Medulla | 5.29 | |
| 5.97 | | |||
| 2610510H03Rik | OLF | Olfactory bulb | 24.89 | |
| 23.51 | | |||
| 2610510H03Rik | P | Pons | 3.21 | |
| 4.07 | | |||
| 2610510H03Rik | PAL | Pallidum | 5.11 | |
| 5.61 | | |||
| 2610510H03Rik | RHP | Retrohippocampal region | 2.24 | |
| 2.09 | | |||
| 2610510H03Rik | sAMY | Striatum-like amygdalar nuclei | 8.02 | |
| 8.94 | | |||
| 2610510H03Rik | STR | Striatum | 5.2 | |
| 4.49 | | |||
| 2610510H03Rik | STRd | Striatum dorsal region | 3.43 | |
| 2.73 | | |||
| 2610510H03Rik | STRv | Striatum ventral region | 12.11 | |
| 9.93 | | |||
| 2610510H03Rik | TH | Thalamus | 2.1 | |
| 1.88 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00002159 | 17 | 90 | 106 | EMACPYSVLISGDIKDR | Peptide Atlas |