Annotation Detail for INO80E
Basic Information Top
| Gene Symbol: | INO80E ( CCDC95,FLJ00079,FLJ90652 ) |
|---|---|
| Gene Full Name: | INO80 complex subunit E |
| Band: | 16p11.2 |
| Quick Links | Entrez ID:283899; OMIM: NA; Uniprot ID:IN80E_HUMAN; ENSEMBL ID: ENSG00000169592; HGNC ID: 26905 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.434864
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 4 / 70761 | 56 |  |
| blastocyst | 7 / 62319 | 112 | |
| fetus | 16 / 564012 | 28 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 4 / 55556 | 71 | |
| adult | 93 / 1939121 | 47 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 2 / 12794 | 156 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 3 / 94178 | 31 | |
| cervical tumor | 2 / 34366 | 58 | |
| chondrosarcoma | 6 / 82823 | 72 | |
| colorectal tumor | 4 / 114246 | 35 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 20 / 119369 | 167 | |
| germ cell tumor | 9 / 263845 | 34 | |
| glioma | 10 / 106883 | 93 | |
| head and neck tumor | 4 / 136302 | 29 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 1 / 95842 | 10 |  |
| liver tumor | 4 / 96359 | 41 | |
| lung tumor | 5 / 103127 | 48 | |
| lymphoma | 10 / 71755 | 139 | |
| non-neoplasia | 2 / 97250 | 20 | |
| normal | 143 / 3360307 | 42 | |
| ovarian tumor | 1 / 76682 | 13 | |
| pancreatic tumor | 3 / 104616 | 28 | |
| primitive neuroectodermal tumor of the CNS | 14 / 125680 | 111 | |
| prostate cancer | 4 / 102680 | 38 | |
| retinoblastoma | 1 / 46356 | 21 | |
| skin tumor | 13 / 124949 | 104 | |
| soft tissue/muscle tissue tumor | 4 / 125191 | 31 | |
| uterine tumor | 10 / 90257 | 110 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 2 / 13106 | 152 | |
| adrenal gland | 3 / 33197 | 90 | |
| ascites | 14 / 40015 | 349 |  |
| bladder | 0 / 29757 | 0 | |
| blood | 2 / 123478 | 16 | |
| bone | 6 / 71655 | 83 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 37 / 1100989 | 33 | |
| cervix | 4 / 48171 | 83 | |
| connective tissue | 3 / 149255 | 20 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 18 / 215722 | 83 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 11 / 211054 | 52 | |
| heart | 2 / 89626 | 22 | |
| intestine | 7 / 234472 | 29 | |
| kidney | 4 / 211777 | 18 | |
| larynx | 1 / 24145 | 41 | |
| liver | 7 / 207743 | 33 | |
| lung | 8 / 336974 | 23 | |
| lymph | 4 / 44270 | 90 | |
| lymph node | 2 / 91610 | 21 | |
| mammary gland | 14 / 153271 | 91 | |
| mouth | 1 / 67052 | 14 | |
| muscle | 2 / 107715 | 18 | |
| nerve | 4 / 15768 | 253 | |
| ovary | 2 / 102051 | 19 | |
| pancreas | 14 / 214812 | 65 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 21 / 280825 | 74 | |
| prostate | 3 / 189345 | 15 | |
| salivary gland | 3 / 20155 | 148 | |
| skin | 17 / 210574 | 80 | |
| spleen | 2 / 53952 | 37 | |
| stomach | 4 / 96619 | 41 | |
| testis | 12 / 330442 | 36 | |
| thymus | 3 / 81131 | 36 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 2 / 16999 | 117 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 15 / 232878 | 64 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: CUST_6388_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 4.28 ± 0.95 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 3.65 ± 0.27 | |
| Basal Part of Pons | 4.06 ± 0.56 | |
| Cerebellar Cortex | 4.21 ± 0.45 | |
| Cerebellar Nuclei | 3.91 ± 0.45 | |
| Claustrum | 3.65 ± 0.9 | |
| Epithalamus | 3.84 ± 0.55 | |
| Frontal Lobe | 4 ± 0.54 | |
| Globus Pallidus | 3.72 ± 0.62 | |
| Hypothalamus | 3.69 ± 0.47 | |
| Insula | 3.93 ± 0.3 | |
| Limbic Lobe | 3.84 ± 0.55 | |
| Mesencephalon | 3.85 ± 0.75 | |
| Myelencephalon | 3.96 ± 0.53 | |
| Occipital Lobe | 3.48 ± 0.56 | |
| Parietal Lobe | 3.99 ± 0.64 | |
| Pontine Tegmentum | 3.82 ± 0.52 | |
| Striatum | 3.58 ± 0.56 | |
| Subthalamus | 3.62 ± 0.16 | |
| Temporal Lobe | 3.96 ± 0.53 | |
| Thalamus | 3.87 ± 0.57 | |
| White Matter | 3.87 ± 0.28 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Ccdc95 | CB | Cerebellum | 100 | |
| 100 | | |||
| Ccdc95 | CTX | Cerebral cortex | 100 | |
| 100 | | |||
| Ccdc95 | HIP | Hippocampal region | 96.15 | |
| 100 | | |||
| Ccdc95 | HPF | Hippocampal formation | 100 | |
| 100 | | |||
| Ccdc95 | HY | Hypothalamus | 43.71 | |
| 44.86 | | |||
| Ccdc95 | LSX | Lateral septal complex | 24.9 | |
| 21.05 | | |||
| Ccdc95 | MB | Midbrain | 55.66 | |
| 60.57 | | |||
| Ccdc95 | MY | Medulla | 55 | |
| 72.79 | | |||
| Ccdc95 | OLF | Olfactory bulb | 99.86 | |
| 100 | | |||
| Ccdc95 | P | Pons | 48.03 | |
| 60.43 | | |||
| Ccdc95 | PAL | Pallidum | 29.36 | |
| 31.49 | | |||
| Ccdc95 | RHP | Retrohippocampal region | 100 | |
| 100 | | |||
| Ccdc95 | sAMY | Striatum-like amygdalar nuclei | 38.52 | |
| 34.46 | | |||
| Ccdc95 | STR | Striatum | 54.05 | |
| 46.52 | | |||
| Ccdc95 | STRd | Striatum dorsal region | 58.43 | |
| 50.98 | | |||
| Ccdc95 | STRv | Striatum ventral region | 53.7 | |
| 43.26 | | |||
| Ccdc95 | TH | Thalamus | 80.76 | |
| 85.89 | |