Annotation Detail for C16orf91
Basic Information Top
| Gene Symbol: | C16orf91 ( CCSMST1,MGC104723,gs103 ) |
|---|---|
| Gene Full Name: | chromosome 16 open reading frame 91 |
| Band: | 16p13.3 |
| Quick Links | Entrez ID:283951; OMIM: NA; Uniprot ID:CSMT1_HUMAN; ENSEMBL ID: ENSG00000174109; HGNC ID: 27558 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.58373
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 6 / 564012 | 10 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 53 / 1939121 | 27 |  |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 2 / 94178 | 21 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 11 / 82823 | 132 |  |
| colorectal tumor | 3 / 114246 | 26 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 6 / 119369 | 50 | |
| germ cell tumor | 4 / 263845 | 15 | |
| glioma | 4 / 106883 | 37 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 9 / 103127 | 87 | |
| lymphoma | 1 / 71755 | 13 | |
| non-neoplasia | 1 / 97250 | 10 | |
| normal | 52 / 3360307 | 15 | |
| ovarian tumor | 1 / 76682 | 13 | |
| pancreatic tumor | 2 / 104616 | 19 | |
| primitive neuroectodermal tumor of the CNS | 4 / 125680 | 31 | |
| prostate cancer | 2 / 102680 | 19 | |
| retinoblastoma | 1 / 46356 | 21 | |
| skin tumor | 6 / 124949 | 48 | |
| soft tissue/muscle tissue tumor | 5 / 125191 | 39 | |
| uterine tumor | 4 / 90257 | 44 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 2 / 40015 | 49 | |
| bladder | 1 / 29757 | 33 | |
| blood | 0 / 123478 | 0 | |
| bone | 9 / 71655 | 125 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 14 / 1100989 | 12 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 4 / 149255 | 26 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 1 / 215722 | 4 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 7 / 211054 | 33 | |
| heart | 2 / 89626 | 22 | |
| intestine | 8 / 234472 | 34 | |
| kidney | 2 / 211777 | 9 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 13 / 336974 | 38 | |
| lymph | 1 / 44270 | 22 | |
| lymph node | 4 / 91610 | 43 | |
| mammary gland | 3 / 153271 | 19 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 3 / 107715 | 27 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 2 / 102051 | 19 | |
| pancreas | 5 / 214812 | 23 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 8 / 280825 | 28 | |
| prostate | 4 / 189345 | 21 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 6 / 210574 | 28 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 2 / 96619 | 20 | |
| testis | 1 / 330442 | 3 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 10 / 232878 | 42 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: CUST_1058_PI416573500
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 2.59 ± 1.06 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 2.28 ± 0.62 | |
| Basal Part of Pons | 2.05 ± 0.43 | |
| Cerebellar Cortex | 2.51 ± 0.75 | |
| Cerebellar Nuclei | 2.59 ± 0.73 | |
| Claustrum | 3.09 ± 0.94 | |
| Epithalamus | 2.13 ± 0.63 | |
| Frontal Lobe | 2.13 ± 0.7 | |
| Globus Pallidus | 2.94 ± 0.67 | |
| Hypothalamus | 2.14 ± 0.79 | |
| Insula | 2.26 ± 1.04 | |
| Limbic Lobe | 2.4 ± 0.84 | |
| Mesencephalon | 2.32 ± 0.78 | |
| Myelencephalon | 2.37 ± 0.75 | |
| Occipital Lobe | 2.42 ± 0.82 | |
| Parietal Lobe | 2.32 ± 0.88 | |
| Pontine Tegmentum | 2.49 ± 0.92 | |
| Striatum | 2.56 ± 0.89 | |
| Subthalamus | 2.43 ± 0.64 | |
| Temporal Lobe | 2.26 ± 0.85 | |
| Thalamus | 2.37 ± 0.7 | |
| White Matter | 2.13 ± 0.15 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| BC003965 | CB | Cerebellum | 2.84 | |
| 3.47 | | |||
| BC003965 | CTX | Cerebral cortex | 22.25 | |
| 17.33 | | |||
| BC003965 | HIP | Hippocampal region | 15.47 | |
| 17.78 | | |||
| BC003965 | HPF | Hippocampal formation | 11.94 | |
| 12.45 | | |||
| BC003965 | HY | Hypothalamus | 0.48 | |
| 0.63 | | |||
| BC003965 | LSX | Lateral septal complex | 5.21 | |
| 7.23 | | |||
| BC003965 | MB | Midbrain | 1.53 | |
| 1.92 | | |||
| BC003965 | MY | Medulla | 0.54 | |
| 0.63 | | |||
| BC003965 | OLF | Olfactory bulb | 18.62 | |
| 15.53 | | |||
| BC003965 | P | Pons | 1.1 | |
| 1.54 | | |||
| BC003965 | PAL | Pallidum | 0.95 | |
| 1.84 | | |||
| BC003965 | RHP | Retrohippocampal region | 5.6 | |
| 4.7 | | |||
| BC003965 | sAMY | Striatum-like amygdalar nuclei | 0.72 | |
| 0.53 | | |||
| BC003965 | STR | Striatum | 2.04 | |
| 1.65 | | |||
| BC003965 | STRd | Striatum dorsal region | 1.24 | |
| 0.93 | | |||
| BC003965 | STRv | Striatum ventral region | 4.13 | |
| 2.66 | | |||
| BC003965 | TH | Thalamus | 1.61 | |
| 1.65 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00039391 | 21 | 193 | 213 | AHPAAEEEDDPDRPIEFSSSK | Peptide Atlas |