Annotation Detail for FAM102B
Basic Information Top
| Gene Symbol: | FAM102B ( DKFZp686N01110,DKFZp779B126 ) |
|---|---|
| Gene Full Name: | family with sequence similarity 102, member B |
| Band: | 1p13.3 |
| Quick Links | Entrez ID:284611; OMIM: NA; Uniprot ID:F102B_HUMAN; ENSEMBL ID: ENSG00000162636; HGNC ID: 27637 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.200230
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 2 / 62319 | 32 |  |
| fetus | 21 / 564012 | 37 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 42 / 1939121 | 21 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 2 / 94178 | 21 | |
| cervical tumor | 1 / 34366 | 29 | |
| chondrosarcoma | 4 / 82823 | 48 | |
| colorectal tumor | 1 / 114246 | 8 |  |
| esophageal tumor | 1 / 17290 | 57 |  |
| gastrointestinal tumor | 2 / 119369 | 16 | |
| germ cell tumor | 6 / 263845 | 22 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 2 / 136302 | 14 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 4 / 95842 | 41 | |
| liver tumor | 1 / 96359 | 10 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 1 / 71755 | 13 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 77 / 3360307 | 22 | |
| ovarian tumor | 3 / 76682 | 39 | |
| pancreatic tumor | 1 / 104616 | 9 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 1 / 102680 | 9 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 12 / 124949 | 96 | |
| soft tissue/muscle tissue tumor | 3 / 125191 | 23 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 0 / 29757 | 0 | |
| blood | 1 / 123478 | 8 | |
| bone | 2 / 71655 | 27 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 12 / 1100989 | 10 | |
| cervix | 3 / 48171 | 62 | |
| connective tissue | 3 / 149255 | 20 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 4 / 215722 | 18 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 4 / 211054 | 18 | |
| heart | 0 / 89626 | 0 | |
| intestine | 2 / 234472 | 8 | |
| kidney | 1 / 211777 | 4 | |
| larynx | 0 / 24145 | 0 | |
| liver | 3 / 207743 | 14 | |
| lung | 5 / 336974 | 14 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 5 / 91610 | 54 | |
| mammary gland | 9 / 153271 | 58 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 2 / 107715 | 18 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 3 / 102051 | 29 | |
| pancreas | 1 / 214812 | 4 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 1 / 280825 | 3 | |
| prostate | 3 / 189345 | 15 | |
| salivary gland | 1 / 20155 | 49 | |
| skin | 13 / 210574 | 61 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 2 / 96619 | 20 | |
| testis | 3 / 330442 | 9 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 2 / 47473 | 42 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 2 / 52413 | 38 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 4 / 232878 | 17 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_24_P237927
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 7.12 ± 0.37 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 7.19 ± 0.41 | |
| Basal Part of Pons | 6.33 ± 0.38 | |
| Cerebellar Cortex | 6.98 ± 0.32 | |
| Cerebellar Nuclei | 5.88 ± 0.77 | |
| Claustrum | 8.09 ± 0.25 | |
| Epithalamus | 6.02 ± 0.59 | |
| Frontal Lobe | 7.08 ± 0.51 | |
| Globus Pallidus | 5.55 ± 0.65 | |
| Hypothalamus | 6.73 ± 0.7 | |
| Insula | 7.22 ± 0.22 | |
| Limbic Lobe | 7.21 ± 0.44 | |
| Mesencephalon | 6.8 ± 0.71 | |
| Myelencephalon | 6.73 ± 0.65 | |
| Occipital Lobe | 6.36 ± 0.59 | |
| Parietal Lobe | 6.96 ± 0.49 | |
| Pontine Tegmentum | 7.09 ± 0.64 | |
| Striatum | 5.93 ± 0.62 | |
| Subthalamus | 6.78 ± 0.61 | |
| Temporal Lobe | 7.12 ± 0.34 | |
| Thalamus | 6.76 ± 0.4 | |
| White Matter | 4.99 ± 0.59 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| B430201A12Rik | CB | Cerebellum | 1.79 | |
| 2.06 | | |||
| B430201A12Rik | CTX | Cerebral cortex | 7.38 | |
| 5.7 | | |||
| B430201A12Rik | HIP | Hippocampal region | 6.03 | |
| 5.45 | | |||
| B430201A12Rik | HPF | Hippocampal formation | 4.92 | |
| 4.14 | | |||
| B430201A12Rik | HY | Hypothalamus | 1.48 | |
| 1.28 | | |||
| B430201A12Rik | LSX | Lateral septal complex | 2.77 | |
| 2.43 | | |||
| B430201A12Rik | MB | Midbrain | 2.43 | |
| 2.94 | | |||
| B430201A12Rik | MY | Medulla | 2.08 | |
| 2.58 | | |||
| B430201A12Rik | OLF | Olfactory bulb | 22.82 | |
| 23.56 | | |||
| B430201A12Rik | P | Pons | 1.48 | |
| 1.91 | | |||
| B430201A12Rik | PAL | Pallidum | 6.29 | |
| 6.51 | | |||
| B430201A12Rik | RHP | Retrohippocampal region | 3.47 | |
| 2.6 | | |||
| B430201A12Rik | sAMY | Striatum-like amygdalar nuclei | 8.54 | |
| 6.44 | | |||
| B430201A12Rik | STR | Striatum | 37.51 | |
| 31.12 | | |||
| B430201A12Rik | STRd | Striatum dorsal region | 42.8 | |
| 35.36 | | |||
| B430201A12Rik | STRv | Striatum ventral region | 49 | |
| 41.56 | | |||
| B430201A12Rik | TH | Thalamus | 11.84 | |
| 12.14 | |