Annotation Detail for SLC9A9
Basic Information Top
| Gene Symbol: | SLC9A9 ( AUTS16,FLJ35613,NHE9 ) |
|---|---|
| Gene Full Name: | solute carrier family 9 (sodium/hydrogen exchanger), member 9 |
| Band: | 3q24 |
| Quick Links | Entrez ID:285195; OMIM: 608396; Uniprot ID:SL9A9_HUMAN; ENSEMBL ID: ENSG00000181804; HGNC ID: 20653 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.302257
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 1 / 62319 | 16 |  |
| fetus | 21 / 564012 | 37 | |
| neonate | 3 / 31097 | 96 |  |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 51 / 1939121 | 26 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 2 / 94178 | 21 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 3 / 82823 | 36 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 9 / 263845 | 34 | |
| glioma | 1 / 106883 | 9 |  |
| head and neck tumor | 8 / 136302 | 58 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 5 / 71755 | 69 | |
| non-neoplasia | 10 / 97250 | 102 | |
| normal | 143 / 3360307 | 42 | |
| ovarian tumor | 1 / 76682 | 13 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 1 / 125191 | 7 | |
| uterine tumor | 3 / 90257 | 33 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 4 / 123478 | 32 | |
| bone | 1 / 71655 | 13 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 67 / 1100989 | 60 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 10 / 149255 | 66 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 2 / 215722 | 9 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 8 / 211054 | 37 | |
| heart | 5 / 89626 | 55 | |
| intestine | 0 / 234472 | 0 | |
| kidney | 4 / 211777 | 18 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 3 / 336974 | 8 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 4 / 153271 | 26 | |
| mouth | 8 / 67052 | 119 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 2 / 15768 | 126 | |
| ovary | 3 / 102051 | 29 | |
| pancreas | 8 / 214812 | 37 | |
| parathyroid | 1 / 20539 | 48 | |
| pharynx | 2 / 41328 | 48 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 7 / 280825 | 24 | |
| prostate | 1 / 189345 | 5 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 4 / 210574 | 18 | |
| spleen | 6 / 53952 | 111 | |
| stomach | 0 / 96619 | 0 | |
| testis | 11 / 330442 | 33 | |
| thymus | 12 / 81131 | 147 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 11 / 52413 | 209 |  |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 18 / 232878 | 77 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_23_P212482
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 3.33 ± 1.1 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 3.03 ± 0.62 | |
| Basal Part of Pons | 2.91 ± 0.63 | |
| Cerebellar Cortex | 2.63 ± 0.58 | |
| Cerebellar Nuclei | 3.55 ± 0.96 | |
| Claustrum | 3.5 ± 0.61 | |
| Epithalamus | 3.24 ± 0.69 | |
| Frontal Lobe | 3.04 ± 0.74 | |
| Globus Pallidus | 4.58 ± 0.43 | |
| Hypothalamus | 3.32 ± 0.92 | |
| Insula | 2.55 ± 0.56 | |
| Limbic Lobe | 2.94 ± 0.83 | |
| Mesencephalon | 3.29 ± 0.81 | |
| Myelencephalon | 3.14 ± 0.74 | |
| Occipital Lobe | 3.27 ± 0.82 | |
| Parietal Lobe | 3.11 ± 0.78 | |
| Pontine Tegmentum | 3.4 ± 0.71 | |
| Striatum | 3.56 ± 0.66 | |
| Subthalamus | 3.2 ± 0.26 | |
| Temporal Lobe | 2.95 ± 0.72 | |
| Thalamus | 3.31 ± 0.55 | |
| White Matter | 5.21 ± 0.22 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Slc9a9 | CB | Cerebellum | 4.46 | |
| 4.42 | | |||
| Slc9a9 | CTX | Cerebral cortex | 35.4 | |
| 24.83 | | |||
| Slc9a9 | HIP | Hippocampal region | 18.07 | |
| 18.03 | | |||
| Slc9a9 | HPF | Hippocampal formation | 15.6 | |
| 13.67 | | |||
| Slc9a9 | HY | Hypothalamus | 1.71 | |
| 1.21 | | |||
| Slc9a9 | LSX | Lateral septal complex | 2.85 | |
| 2.23 | | |||
| Slc9a9 | MB | Midbrain | 4.14 | |
| 3.37 | | |||
| Slc9a9 | MY | Medulla | 6.26 | |
| 6.17 | | |||
| Slc9a9 | OLF | Olfactory bulb | 62.38 | |
| 59.23 | | |||
| Slc9a9 | P | Pons | 3.99 | |
| 4.22 | | |||
| Slc9a9 | PAL | Pallidum | 1.43 | |
| 1.05 | | |||
| Slc9a9 | RHP | Retrohippocampal region | 12.28 | |
| 8.56 | | |||
| Slc9a9 | sAMY | Striatum-like amygdalar nuclei | 2.88 | |
| 1.91 | | |||
| Slc9a9 | STR | Striatum | 1.39 | |
| 1.03 | | |||
| Slc9a9 | STRd | Striatum dorsal region | 1.09 | |
| 0.81 | | |||
| Slc9a9 | STRv | Striatum ventral region | 1.21 | |
| 0.86 | | |||
| Slc9a9 | TH | Thalamus | 1.35 | |
| 1.15 | |