Annotation Detail for CEP57L1
Basic Information Top
| Gene Symbol: | CEP57L1 ( C6orf182,MGC21731,MGC70837,bA487F23.2,cep57R ) |
|---|---|
| Gene Full Name: | centrosomal protein 57kDa-like 1 |
| Band: | 6q21 |
| Quick Links | Entrez ID:285753; OMIM: NA; Uniprot ID:CE57L_HUMAN; ENSEMBL ID: ENSG00000183137; HGNC ID: 21561 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.632616
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 2 / 70761 | 28 |  |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 8 / 564012 | 14 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 2 / 55556 | 35 | |
| adult | 29 / 1939121 | 14 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 1 / 12794 | 78 |  |
| bladder carcinoma | 1 / 17475 | 57 | |
| breast (mammary gland) tumor | 2 / 94178 | 21 | |
| cervical tumor | 1 / 34366 | 29 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 3 / 119369 | 25 | |
| germ cell tumor | 1 / 263845 | 3 |  |
| glioma | 1 / 106883 | 9 | |
| head and neck tumor | 1 / 136302 | 7 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 7 / 95842 | 73 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 1 / 103127 | 9 | |
| lymphoma | 2 / 71755 | 27 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 46 / 3360307 | 13 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 3 / 104616 | 28 | |
| primitive neuroectodermal tumor of the CNS | 2 / 125680 | 15 | |
| prostate cancer | 1 / 102680 | 9 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 2 / 124949 | 16 | |
| soft tissue/muscle tissue tumor | 3 / 125191 | 23 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 3 / 40015 | 74 | |
| bladder | 2 / 29757 | 67 | |
| blood | 10 / 123478 | 80 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 2 / 48801 | 40 | |
| brain | 13 / 1100989 | 11 | |
| cervix | 1 / 48171 | 20 | |
| connective tissue | 1 / 149255 | 6 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 4 / 215722 | 18 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 2 / 211054 | 9 | |
| heart | 1 / 89626 | 11 | |
| intestine | 0 / 234472 | 0 | |
| kidney | 1 / 211777 | 4 | |
| larynx | 0 / 24145 | 0 | |
| liver | 3 / 207743 | 14 | |
| lung | 3 / 336974 | 8 | |
| lymph | 2 / 44270 | 45 | |
| lymph node | 4 / 91610 | 43 | |
| mammary gland | 4 / 153271 | 26 | |
| mouth | 2 / 67052 | 29 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 3 / 214812 | 13 | |
| parathyroid | 3 / 20539 | 146 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 4 / 280825 | 14 | |
| prostate | 1 / 189345 | 5 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 2 / 210574 | 9 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 10 / 330442 | 30 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 1 / 52413 | 19 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 4 / 232878 | 17 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_23_P59358
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 8.48 ± 0.19 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 8.27 ± 0.21 | |
| Basal Part of Pons | 8.23 ± 0.15 | |
| Cerebellar Cortex | 8.4 ± 0.18 | |
| Cerebellar Nuclei | 8.14 ± 0.21 | |
| Claustrum | 8.55 ± 0.2 | |
| Epithalamus | 8.32 ± 0.17 | |
| Frontal Lobe | 8.13 ± 0.24 | |
| Globus Pallidus | 8.27 ± 0.15 | |
| Hypothalamus | 8.01 ± 0.27 | |
| Insula | 8.22 ± 0.2 | |
| Limbic Lobe | 8.36 ± 0.25 | |
| Mesencephalon | 8.14 ± 0.32 | |
| Myelencephalon | 8.21 ± 0.23 | |
| Occipital Lobe | 8.42 ± 0.22 | |
| Parietal Lobe | 8.28 ± 0.22 | |
| Pontine Tegmentum | 8.19 ± 0.26 | |
| Striatum | 7.94 ± 0.19 | |
| Subthalamus | 8.02 ± 0.24 | |
| Temporal Lobe | 8.28 ± 0.21 | |
| Thalamus | 8.17 ± 0.18 | |
| White Matter | 8.73 ± 0.12 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| 2410017P07Rik | CB | Cerebellum | 1.05 | |
| 1.66 | | |||
| 2410017P07Rik | CTX | Cerebral cortex | 0.88 | |
| 0.73 | | |||
| 2410017P07Rik | HIP | Hippocampal region | 1.14 | |
| 1.18 | | |||
| 2410017P07Rik | HPF | Hippocampal formation | 0.97 | |
| 1 | | |||
| 2410017P07Rik | HY | Hypothalamus | 0.15 | |
| 0.17 | | |||
| 2410017P07Rik | LSX | Lateral septal complex | 0.06 | |
| 0.09 | | |||
| 2410017P07Rik | MB | Midbrain | 0.36 | |
| 0.59 | | |||
| 2410017P07Rik | MY | Medulla | 0.44 | |
| 0.59 | | |||
| 2410017P07Rik | OLF | Olfactory bulb | 2.08 | |
| 2.95 | | |||
| 2410017P07Rik | P | Pons | 0.3 | |
| 0.63 | | |||
| 2410017P07Rik | PAL | Pallidum | 0.15 | |
| 0.19 | | |||
| 2410017P07Rik | RHP | Retrohippocampal region | 0.64 | |
| 0.66 | | |||
| 2410017P07Rik | sAMY | Striatum-like amygdalar nuclei | 0.18 | |
| 0.23 | | |||
| 2410017P07Rik | STR | Striatum | 0.5 | |
| 0.5 | | |||
| 2410017P07Rik | STRd | Striatum dorsal region | 0.49 | |
| 0.52 | | |||
| 2410017P07Rik | STRv | Striatum ventral region | 0.72 | |
| 0.57 | | |||
| 2410017P07Rik | TH | Thalamus | 0.33 | |
| 0.35 | |