Annotation Detail for TUSC1
Basic Information Top
| Gene Symbol: | TUSC1 ( MGC131751,TSG-9,TSG9 ) |
|---|---|
| Gene Full Name: | tumor suppressor candidate 1 |
| Band: | 9p21.2 |
| Quick Links | Entrez ID:286319; OMIM: 610529; Uniprot ID:TUSC1_HUMAN; ENSEMBL ID: ENSG00000198680; HGNC ID: 31010 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.26268
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 1 / 564012 | 1 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 29 / 1939121 | 14 |  |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 1 / 12794 | 78 |  |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 |  |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 1 / 17290 | 57 | |
| gastrointestinal tumor | 1 / 119369 | 8 | |
| germ cell tumor | 0 / 263845 | 0 | |
| glioma | 1 / 106883 | 9 | |
| head and neck tumor | 1 / 136302 | 7 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 36 / 3360307 | 10 | |
| ovarian tumor | 2 / 76682 | 26 | |
| pancreatic tumor | 1 / 104616 | 9 | |
| primitive neuroectodermal tumor of the CNS | 1 / 125680 | 7 | |
| prostate cancer | 1 / 102680 | 9 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 3 / 124949 | 24 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 2 / 90257 | 22 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 1 / 29757 | 33 | |
| blood | 0 / 123478 | 0 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 6 / 1100989 | 5 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 1 / 149255 | 6 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 1 / 215722 | 4 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 4 / 211054 | 18 | |
| heart | 0 / 89626 | 0 | |
| intestine | 0 / 234472 | 0 | |
| kidney | 2 / 211777 | 9 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 1 / 336974 | 2 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 3 / 91610 | 32 | |
| mammary gland | 2 / 153271 | 13 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 3 / 102051 | 29 | |
| pancreas | 7 / 214812 | 32 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 2 / 280825 | 7 | |
| prostate | 6 / 189345 | 31 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 3 / 210574 | 14 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 2 / 96619 | 20 | |
| testis | 3 / 330442 | 9 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 2 / 232878 | 8 | |
| vascular | 1 / 51780 | 19 | |
Microarray in - Probe name: A_32_P133884
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 6.87 ± 0.42 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 7.02 ± 0.26 | |
| Basal Part of Pons | 7.56 ± 0.28 | |
| Cerebellar Cortex | 7.34 ± 0.17 | |
| Cerebellar Nuclei | 6.8 ± 0.34 | |
| Claustrum | 6.96 ± 0.48 | |
| Epithalamus | 7.18 ± 0.22 | |
| Frontal Lobe | 7.27 ± 0.26 | |
| Globus Pallidus | 6.3 ± 0.27 | |
| Hypothalamus | 7.55 ± 0.36 | |
| Insula | 7.35 ± 0.26 | |
| Limbic Lobe | 7.08 ± 0.42 | |
| Mesencephalon | 7.08 ± 0.39 | |
| Myelencephalon | 7.12 ± 0.43 | |
| Occipital Lobe | 6.92 ± 0.33 | |
| Parietal Lobe | 7.12 ± 0.34 | |
| Pontine Tegmentum | 7.04 ± 0.25 | |
| Striatum | 6.61 ± 0.42 | |
| Subthalamus | 7.05 ± 0.21 | |
| Temporal Lobe | 7.26 ± 0.29 | |
| Thalamus | 7.11 ± 0.27 | |
| White Matter | 6.96 ± 0.23 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Tusc1 | CB | Cerebellum | 24.71 | |
| 30.33 | | |||
| Tusc1 | CTX | Cerebral cortex | 57.36 | |
| 43.25 | | |||
| Tusc1 | HIP | Hippocampal region | 37.2 | |
| 44.86 | | |||
| Tusc1 | HPF | Hippocampal formation | 40.26 | |
| 43.32 | | |||
| Tusc1 | HY | Hypothalamus | 14.71 | |
| 11.67 | | |||
| Tusc1 | LSX | Lateral septal complex | 4.83 | |
| 3.11 | | |||
| Tusc1 | MB | Midbrain | 22.54 | |
| 19.47 | | |||
| Tusc1 | MY | Medulla | 22.11 | |
| 22.31 | | |||
| Tusc1 | OLF | Olfactory bulb | 46.85 | |
| 41.27 | | |||
| Tusc1 | P | Pons | 27.14 | |
| 26.52 | | |||
| Tusc1 | PAL | Pallidum | 19.09 | |
| 15.84 | | |||
| Tusc1 | RHP | Retrohippocampal region | 45.61 | |
| 41.45 | | |||
| Tusc1 | sAMY | Striatum-like amygdalar nuclei | 45.47 | |
| 32.16 | | |||
| Tusc1 | STR | Striatum | 27.44 | |
| 19.83 | | |||
| Tusc1 | STRd | Striatum dorsal region | 29.21 | |
| 21.59 | | |||
| Tusc1 | STRv | Striatum ventral region | 23.52 | |
| 15.44 | | |||
| Tusc1 | TH | Thalamus | 28.46 | |
| 24.75 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00499936 | 13 | 65 | 77 | FADLAASHLEAIR | Peptide Atlas |