Annotation Detail for GPX1
Basic Information Top
| Gene Symbol: | GPX1 ( GSHPX1,MGC14399,MGC88245 ) |
|---|---|
| Gene Full Name: | glutathione peroxidase 1 |
| Band: | 3p21.31 |
| Quick Links | Entrez ID:2876; OMIM: 138320; Uniprot ID:GPX1_HUMAN; ENSEMBL ID: ENSG00000233276; HGNC ID: 4553 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.76686
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 18 / 70761 | 254 |  |
| blastocyst | 9 / 62319 | 144 |  |
| fetus | 48 / 564012 | 85 | |
| neonate | 13 / 31097 | 418 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 4 / 55556 | 71 | |
| adult | 225 / 1939121 | 116 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 1 / 17475 | 57 | |
| breast (mammary gland) tumor | 4 / 94178 | 42 |  |
| cervical tumor | 10 / 34366 | 290 | |
| chondrosarcoma | 21 / 82823 | 253 | |
| colorectal tumor | 7 / 114246 | 61 | |
| esophageal tumor | 4 / 17290 | 231 | |
| gastrointestinal tumor | 36 / 119369 | 301 | |
| germ cell tumor | 29 / 263845 | 109 | |
| glioma | 13 / 106883 | 121 | |
| head and neck tumor | 20 / 136302 | 146 | |
| kidney tumor | 10 / 68959 | 145 | |
| leukemia | 7 / 95842 | 73 | |
| liver tumor | 33 / 96359 | 342 | |
| lung tumor | 26 / 103127 | 252 | |
| lymphoma | 9 / 71755 | 125 | |
| non-neoplasia | 7 / 97250 | 71 | |
| normal | 400 / 3360307 | 119 | |
| ovarian tumor | 14 / 76682 | 182 | |
| pancreatic tumor | 21 / 104616 | 200 | |
| primitive neuroectodermal tumor of the CNS | 12 / 125680 | 95 | |
| prostate cancer | 11 / 102680 | 107 | |
| retinoblastoma | 6 / 46356 | 129 | |
| skin tumor | 60 / 124949 | 480 | |
| soft tissue/muscle tissue tumor | 38 / 125191 | 303 | |
| uterine tumor | 12 / 90257 | 132 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 11 / 13106 | 839 | |
| adrenal gland | 7 / 33197 | 210 | |
| ascites | 14 / 40015 | 349 | |
| bladder | 2 / 29757 | 67 | |
| blood | 13 / 123478 | 105 | |
| bone | 7 / 71655 | 97 | |
| bone marrow | 3 / 48801 | 61 | |
| brain | 58 / 1100989 | 52 | |
| cervix | 11 / 48171 | 228 | |
| connective tissue | 20 / 149255 | 133 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 38 / 215722 | 176 | |
| esophagus | 4 / 20209 | 197 | |
| eye | 32 / 211054 | 151 | |
| heart | 23 / 89626 | 256 | |
| intestine | 25 / 234472 | 106 | |
| kidney | 18 / 211777 | 84 | |
| larynx | 0 / 24145 | 0 | |
| liver | 40 / 207743 | 192 | |
| lung | 63 / 336974 | 186 | |
| lymph | 3 / 44270 | 67 | |
| lymph node | 22 / 91610 | 240 | |
| mammary gland | 8 / 153271 | 52 | |
| mouth | 2 / 67052 | 29 | |
| muscle | 6 / 107715 | 55 | |
| nerve | 3 / 15768 | 190 | |
| ovary | 18 / 102051 | 176 | |
| pancreas | 32 / 214812 | 148 | |
| parathyroid | 14 / 20539 | 681 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 27 / 280825 | 96 | |
| prostate | 19 / 189345 | 100 | |
| salivary gland | 16 / 20155 | 793 | |
| skin | 80 / 210574 | 379 | |
| spleen | 6 / 53952 | 111 | |
| stomach | 40 / 96619 | 413 | |
| testis | 18 / 330442 | 54 | |
| thymus | 5 / 81131 | 61 | |
| thyroid | 3 / 47473 | 63 | |
| tonsil | 1 / 16999 | 58 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 12 / 13680 | 877 | |
| uterus | 40 / 232878 | 171 | |
| vascular | 12 / 51780 | 231 | |
Microarray in - Probe name: CUST_15081_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 7.41 ± 0.37 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 7.74 ± 0.18 | |
| Basal Part of Pons | 7.89 ± 0.47 | |
| Cerebellar Cortex | 7.61 ± 0.36 | |
| Cerebellar Nuclei | 8 ± 0.28 | |
| Claustrum | 7.3 ± 0.68 | |
| Epithalamus | 8.04 ± 0.37 | |
| Frontal Lobe | 7.93 ± 0.42 | |
| Globus Pallidus | 7.47 ± 0.49 | |
| Hypothalamus | 8.42 ± 0.39 | |
| Insula | 7.87 ± 0.37 | |
| Limbic Lobe | 7.39 ± 0.47 | |
| Mesencephalon | 7.77 ± 0.45 | |
| Myelencephalon | 7.67 ± 0.55 | |
| Occipital Lobe | 7.16 ± 0.48 | |
| Parietal Lobe | 7.78 ± 0.49 | |
| Pontine Tegmentum | 7.68 ± 0.45 | |
| Striatum | 7.11 ± 0.5 | |
| Subthalamus | 7.82 ± 0.55 | |
| Temporal Lobe | 7.9 ± 0.43 | |
| Thalamus | 7.57 ± 0.42 | |
| White Matter | 6.46 ± 0.17 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Gpx1 | CB | Cerebellum | 5.18 | |
| 6.33 | | |||
| Gpx1 | CTX | Cerebral cortex | 4.35 | |
| 3.86 | | |||
| Gpx1 | HIP | Hippocampal region | 2.45 | |
| 2.76 | | |||
| Gpx1 | HPF | Hippocampal formation | 1.89 | |
| 1.96 | | |||
| Gpx1 | HY | Hypothalamus | 2.38 | |
| 2.62 | | |||
| Gpx1 | LSX | Lateral septal complex | 1.84 | |
| 1.6 | | |||
| Gpx1 | MB | Midbrain | 2.03 | |
| 2.56 | | |||
| Gpx1 | MY | Medulla | 4.28 | |
| 5.64 | | |||
| Gpx1 | OLF | Olfactory bulb | 5.73 | |
| 4.24 | | |||
| Gpx1 | P | Pons | 3.27 | |
| 4.67 | | |||
| Gpx1 | PAL | Pallidum | 2.95 | |
| 3.06 | | |||
| Gpx1 | RHP | Retrohippocampal region | 0.89 | |
| 0.74 | | |||
| Gpx1 | sAMY | Striatum-like amygdalar nuclei | 2.33 | |
| 2.03 | | |||
| Gpx1 | STR | Striatum | 6.3 | |
| 4.6 | | |||
| Gpx1 | STRd | Striatum dorsal region | 8.1 | |
| 6.03 | | |||
| Gpx1 | STRv | Striatum ventral region | 3.92 | |
| 2.42 | | |||
| Gpx1 | TH | Thalamus | 10.26 | |
| 16.36 | |