Annotation Detail for GPX3
Basic Information Top
| Gene Symbol: | GPX3 ( GPx-P,GSHPx-3,GSHPx-P ) |
|---|---|
| Gene Full Name: | glutathione peroxidase 3 (plasma) |
| Band: | 5q33.1 |
| Quick Links | Entrez ID:2878; OMIM: 138321; Uniprot ID:GPX3_HUMAN; ENSEMBL ID: ENSG00000211445; HGNC ID: 4555 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.386793
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 3 / 62319 | 48 |  |
| fetus | 64 / 564012 | 113 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 1 / 23620 | 42 | |
| juvenile | 7 / 55556 | 125 | |
| adult | 1059 / 1939121 | 546 |  |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 1 / 12794 | 78 | |
| bladder carcinoma | 8 / 17475 | 457 | |
| breast (mammary gland) tumor | 6 / 94178 | 63 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 6 / 82823 | 72 | |
| colorectal tumor | 8 / 114246 | 70 | |
| esophageal tumor | 1 / 17290 | 57 | |
| gastrointestinal tumor | 5 / 119369 | 41 | |
| germ cell tumor | 3 / 263845 | 11 | |
| glioma | 14 / 106883 | 130 | |
| head and neck tumor | 53 / 136302 | 388 | |
| kidney tumor | 124 / 68959 | 1798 |  |
| leukemia | 3 / 95842 | 31 | |
| liver tumor | 22 / 96359 | 228 | |
| lung tumor | 30 / 103127 | 290 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 225 / 97250 | 2313 | |
| normal | 1266 / 3360307 | 376 | |
| ovarian tumor | 31 / 76682 | 404 | |
| pancreatic tumor | 17 / 104616 | 162 | |
| primitive neuroectodermal tumor of the CNS | 22 / 125680 | 175 | |
| prostate cancer | 2 / 102680 | 19 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 4 / 124949 | 32 | |
| soft tissue/muscle tissue tumor | 19 / 125191 | 151 | |
| uterine tumor | 8 / 90257 | 88 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 12 / 13106 | 915 | |
| adrenal gland | 3 / 33197 | 90 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 8 / 29757 | 268 | |
| blood | 4 / 123478 | 32 | |
| bone | 4 / 71655 | 55 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 101 / 1100989 | 91 | |
| cervix | 1 / 48171 | 20 | |
| connective tissue | 367 / 149255 | 2458 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 7 / 215722 | 32 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 381 / 211054 | 1805 | |
| heart | 15 / 89626 | 167 | |
| intestine | 19 / 234472 | 81 | |
| kidney | 209 / 211777 | 986 | |
| larynx | 38 / 24145 | 1573 | |
| liver | 45 / 207743 | 216 | |
| lung | 86 / 336974 | 255 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 24 / 153271 | 156 | |
| mouth | 1 / 67052 | 14 | |
| muscle | 8 / 107715 | 74 | |
| nerve | 10 / 15768 | 634 | |
| ovary | 32 / 102051 | 313 | |
| pancreas | 54 / 214812 | 251 | |
| parathyroid | 4 / 20539 | 194 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 8 / 16585 | 482 | |
| placenta | 192 / 280825 | 683 | |
| prostate | 5 / 189345 | 26 | |
| salivary gland | 12 / 20155 | 595 | |
| skin | 7 / 210574 | 33 | |
| spleen | 9 / 53952 | 166 | |
| stomach | 9 / 96619 | 93 | |
| testis | 7 / 330442 | 21 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 122 / 47473 | 2569 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 39 / 232878 | 167 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_23_P133474
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 5.59 ± 1 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 8.05 ± 0.41 | |
| Basal Part of Pons | 6.12 ± 0.48 | |
| Cerebellar Cortex | 6.66 ± 0.73 | |
| Cerebellar Nuclei | 7.5 ± 0.72 | |
| Claustrum | 5.07 ± 1.03 | |
| Epithalamus | 6.73 ± 0.55 | |
| Frontal Lobe | 6.85 ± 0.79 | |
| Globus Pallidus | 6.25 ± 0.86 | |
| Hypothalamus | 8.56 ± 0.29 | |
| Insula | 6.5 ± 0.62 | |
| Limbic Lobe | 6.07 ± 0.77 | |
| Mesencephalon | 7.04 ± 0.74 | |
| Myelencephalon | 6.5 ± 1.03 | |
| Occipital Lobe | 5.07 ± 0.84 | |
| Parietal Lobe | 6.72 ± 0.59 | |
| Pontine Tegmentum | 6.58 ± 0.96 | |
| Striatum | 7.23 ± 1.03 | |
| Subthalamus | 7.06 ± 0.49 | |
| Temporal Lobe | 6.07 ± 0.68 | |
| Thalamus | 5.75 ± 1.04 | |
| White Matter | 4.95 ± 0.96 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Gpx3 | CB | Cerebellum | 2.34 | |
| 4.86 | | |||
| Gpx3 | CTX | Cerebral cortex | 2.36 | |
| 1.61 | | |||
| Gpx3 | HIP | Hippocampal region | 0.56 | |
| 0.45 | | |||
| Gpx3 | HPF | Hippocampal formation | 1.31 | |
| 0.88 | | |||
| Gpx3 | HY | Hypothalamus | 55.04 | |
| 41.94 | | |||
| Gpx3 | LSX | Lateral septal complex | 4.9 | |
| 1.66 | | |||
| Gpx3 | MB | Midbrain | 8.54 | |
| 9.33 | | |||
| Gpx3 | MY | Medulla | 8.84 | |
| 9.61 | | |||
| Gpx3 | OLF | Olfactory bulb | 4.48 | |
| 2.71 | | |||
| Gpx3 | P | Pons | 13.4 | |
| 14.16 | | |||
| Gpx3 | PAL | Pallidum | 14.41 | |
| 10.37 | | |||
| Gpx3 | RHP | Retrohippocampal region | 2.22 | |
| 1.31 | | |||
| Gpx3 | sAMY | Striatum-like amygdalar nuclei | 32.88 | |
| 21.41 | | |||
| Gpx3 | STR | Striatum | 4.16 | |
| 2.57 | | |||
| Gpx3 | STRd | Striatum dorsal region | 0.47 | |
| 0.31 | | |||
| Gpx3 | STRv | Striatum ventral region | 0.56 | |
| 0.32 | | |||
| Gpx3 | TH | Thalamus | 4.71 | |
| 3.76 | |