Annotation Detail for FLVCR1
Basic Information Top
| Gene Symbol: | FLVCR1 ( FLVCR,MFSD7B ) |
|---|---|
| Gene Full Name: | feline leukemia virus subgroup C cellular receptor 1 |
| Band: | 1q32.3 |
| Quick Links | Entrez ID:28982; OMIM: 609144; Uniprot ID:FLVC1_HUMAN; ENSEMBL ID: ENSG00000162769; HGNC ID: 24682 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.7055
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 2 / 70761 | 28 |  |
| blastocyst | 2 / 62319 | 32 | |
| fetus | 7 / 564012 | 12 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 24 / 1939121 | 12 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 1 / 12794 | 78 |  |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 3 / 94178 | 31 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 3 / 114246 | 26 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 1 / 119369 | 8 |  |
| germ cell tumor | 10 / 263845 | 37 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 2 / 68959 | 29 | |
| leukemia | 1 / 95842 | 10 | |
| liver tumor | 3 / 96359 | 31 | |
| lung tumor | 2 / 103127 | 19 | |
| lymphoma | 5 / 71755 | 69 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 32 / 3360307 | 9 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 1 / 104616 | 9 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 1 / 102680 | 9 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 1 / 124949 | 8 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 2 / 13106 | 152 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 2 / 123478 | 16 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 9 / 1100989 | 8 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 7 / 215722 | 32 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 0 / 211054 | 0 | |
| heart | 0 / 89626 | 0 | |
| intestine | 5 / 234472 | 21 | |
| kidney | 2 / 211777 | 9 | |
| larynx | 0 / 24145 | 0 | |
| liver | 3 / 207743 | 14 | |
| lung | 5 / 336974 | 14 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 1 / 91610 | 10 | |
| mammary gland | 4 / 153271 | 26 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 1 / 214812 | 4 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 2 / 16585 | 120 | |
| placenta | 5 / 280825 | 17 | |
| prostate | 4 / 189345 | 21 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 1 / 210574 | 4 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 9 / 330442 | 27 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 1 / 52413 | 19 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 0 / 232878 | 0 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: CUST_9085_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 5.09 ± 0.44 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 4.88 ± 0.38 | |
| Basal Part of Pons | 5.17 ± 0.23 | |
| Cerebellar Cortex | 5.33 ± 0.31 | |
| Cerebellar Nuclei | 5.73 ± 0.51 | |
| Claustrum | 5.42 ± 0.57 | |
| Epithalamus | 5.27 ± 0.38 | |
| Frontal Lobe | 5.14 ± 0.42 | |
| Globus Pallidus | 5.27 ± 0.3 | |
| Hypothalamus | 5.83 ± 0.32 | |
| Insula | 4.99 ± 0.34 | |
| Limbic Lobe | 5.15 ± 0.41 | |
| Mesencephalon | 5.26 ± 0.46 | |
| Myelencephalon | 5.07 ± 0.52 | |
| Occipital Lobe | 5.08 ± 0.43 | |
| Parietal Lobe | 5.06 ± 0.44 | |
| Pontine Tegmentum | 5.2 ± 0.51 | |
| Striatum | 4.89 ± 0.6 | |
| Subthalamus | 5.4 ± 0.73 | |
| Temporal Lobe | 5.14 ± 0.47 | |
| Thalamus | 4.97 ± 0.34 | |
| White Matter | 5.84 ± 0.22 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| 9630055N22Rik | CB | Cerebellum | 4.76 | |
| 5.63 | | |||
| 9630055N22Rik | CTX | Cerebral cortex | 4.34 | |
| 3.35 | | |||
| 9630055N22Rik | HIP | Hippocampal region | 5.45 | |
| 5.03 | | |||
| 9630055N22Rik | HPF | Hippocampal formation | 6.43 | |
| 5.46 | | |||
| 9630055N22Rik | HY | Hypothalamus | 0.73 | |
| 0.61 | | |||
| 9630055N22Rik | LSX | Lateral septal complex | 0.54 | |
| 0.38 | | |||
| 9630055N22Rik | MB | Midbrain | 1.48 | |
| 1.58 | | |||
| 9630055N22Rik | MY | Medulla | 3.26 | |
| 3.14 | | |||
| 9630055N22Rik | OLF | Olfactory bulb | 6.93 | |
| 6.3 | | |||
| 9630055N22Rik | P | Pons | 1.22 | |
| 1.62 | | |||
| 9630055N22Rik | PAL | Pallidum | 1.58 | |
| 1.21 | | |||
| 9630055N22Rik | RHP | Retrohippocampal region | 8.56 | |
| 6.27 | | |||
| 9630055N22Rik | sAMY | Striatum-like amygdalar nuclei | 3.2 | |
| 3.86 | | |||
| 9630055N22Rik | STR | Striatum | 1.32 | |
| 1.19 | | |||
| 9630055N22Rik | STRd | Striatum dorsal region | 0.62 | |
| 0.63 | | |||
| 9630055N22Rik | STRv | Striatum ventral region | 3.4 | |
| 2.24 | | |||
| 9630055N22Rik | TH | Thalamus | 1.93 | |
| 1.7 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00040788 | 13 | 518 | 530 | HNINIGITNVDVK | Peptide Atlas |