Annotation Detail for C16orf72
Basic Information Top
| Gene Symbol: | C16orf72 ( FLJ41272,PRO0149 ) |
|---|---|
| Gene Full Name: | chromosome 16 open reading frame 72 |
| Band: | 16p13.2 |
| Quick Links | Entrez ID:29035; OMIM: NA; Uniprot ID:CP072_HUMAN; ENSEMBL ID: ENSG00000182831; HGNC ID: 30103 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.221497
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 2 / 70761 | 28 |  |
| blastocyst | 3 / 62319 | 48 | |
| fetus | 24 / 564012 | 42 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 4 / 55556 | 71 |  |
| adult | 126 / 1939121 | 64 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 6 / 94178 | 63 | |
| cervical tumor | 1 / 34366 | 29 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 4 / 114246 | 35 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 4 / 119369 | 33 | |
| germ cell tumor | 19 / 263845 | 72 | |
| glioma | 2 / 106883 | 18 | |
| head and neck tumor | 13 / 136302 | 95 | |
| kidney tumor | 2 / 68959 | 29 | |
| leukemia | 2 / 95842 | 20 | |
| liver tumor | 3 / 96359 | 31 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 3 / 97250 | 30 | |
| normal | 185 / 3360307 | 55 | |
| ovarian tumor | 6 / 76682 | 78 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 3 / 125680 | 23 | |
| prostate cancer | 4 / 102680 | 38 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 4 / 124949 | 32 | |
| soft tissue/muscle tissue tumor | 3 / 125191 | 23 | |
| uterine tumor | 5 / 90257 | 55 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 1 / 13106 | 76 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 2 / 40015 | 49 | |
| bladder | 1 / 29757 | 33 | |
| blood | 4 / 123478 | 32 | |
| bone | 2 / 71655 | 27 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 32 / 1100989 | 29 | |
| cervix | 1 / 48171 | 20 | |
| connective tissue | 2 / 149255 | 13 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 9 / 215722 | 41 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 8 / 211054 | 37 | |
| heart | 1 / 89626 | 11 | |
| intestine | 5 / 234472 | 21 | |
| kidney | 15 / 211777 | 70 | |
| larynx | 7 / 24145 | 289 |  |
| liver | 5 / 207743 | 24 | |
| lung | 18 / 336974 | 53 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 12 / 91610 | 130 | |
| mammary gland | 12 / 153271 | 78 | |
| mouth | 3 / 67052 | 44 | |
| muscle | 2 / 107715 | 18 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 8 / 102051 | 78 | |
| pancreas | 8 / 214812 | 37 | |
| parathyroid | 3 / 20539 | 146 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 15 / 280825 | 53 | |
| prostate | 28 / 189345 | 147 | |
| salivary gland | 3 / 20155 | 148 | |
| skin | 7 / 210574 | 33 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 2 / 96619 | 20 | |
| testis | 18 / 330442 | 54 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 1 / 16999 | 58 | |
| trachea | 3 / 52413 | 57 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 9 / 232878 | 38 | |
| vascular | 2 / 51780 | 38 | |
Microarray in - Probe name: CUST_245_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 8.81 ± 0.23 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 8.62 ± 0.18 | |
| Basal Part of Pons | 8.71 ± 0.2 | |
| Cerebellar Cortex | 8.63 ± 0.25 | |
| Cerebellar Nuclei | 8.57 ± 0.26 | |
| Claustrum | 8.84 ± 0.28 | |
| Epithalamus | 8.46 ± 0.26 | |
| Frontal Lobe | 8.65 ± 0.28 | |
| Globus Pallidus | 8.24 ± 0.19 | |
| Hypothalamus | 8.55 ± 0.33 | |
| Insula | 8.65 ± 0.27 | |
| Limbic Lobe | 8.79 ± 0.25 | |
| Mesencephalon | 8.65 ± 0.35 | |
| Myelencephalon | 8.68 ± 0.3 | |
| Occipital Lobe | 8.91 ± 0.24 | |
| Parietal Lobe | 8.77 ± 0.29 | |
| Pontine Tegmentum | 8.62 ± 0.29 | |
| Striatum | 8.74 ± 0.34 | |
| Subthalamus | 8.62 ± 0.19 | |
| Temporal Lobe | 8.72 ± 0.26 | |
| Thalamus | 8.64 ± 0.24 | |
| White Matter | 8.39 ± 0.24 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| 1810013L24Rik | CB | Cerebellum | 1.73 | |
| 1.74 | | |||
| 1810013L24Rik | CTX | Cerebral cortex | 1.89 | |
| 1.4 | | |||
| 1810013L24Rik | HIP | Hippocampal region | 3.01 | |
| 2.33 | | |||
| 1810013L24Rik | HPF | Hippocampal formation | 2.39 | |
| 1.75 | | |||
| 1810013L24Rik | HY | Hypothalamus | 0.22 | |
| 0.18 | | |||
| 1810013L24Rik | LSX | Lateral septal complex | 0.03 | |
| 0 | | |||
| 1810013L24Rik | MB | Midbrain | 0.41 | |
| 0.39 | | |||
| 1810013L24Rik | MY | Medulla | 2.71 | |
| 3.21 | | |||
| 1810013L24Rik | OLF | Olfactory bulb | 2.11 | |
| 2.01 | | |||
| 1810013L24Rik | P | Pons | 1.23 | |
| 1.43 | | |||
| 1810013L24Rik | PAL | Pallidum | 0.22 | |
| 0.2 | | |||
| 1810013L24Rik | RHP | Retrohippocampal region | 1.04 | |
| 0.72 | | |||
| 1810013L24Rik | sAMY | Striatum-like amygdalar nuclei | 3.14 | |
| 3.82 | | |||
| 1810013L24Rik | STR | Striatum | 0.5 | |
| 0.52 | | |||
| 1810013L24Rik | STRd | Striatum dorsal region | 0.31 | |
| 0.3 | | |||
| 1810013L24Rik | STRv | Striatum ventral region | 0.3 | |
| 0.19 | | |||
| 1810013L24Rik | TH | Thalamus | 0.47 | |
| 0.33 | |