Annotation Detail for PHPT1
Basic Information Top
| Gene Symbol: | PHPT1 ( CGI-202,DKFZp564M173,HSPC141,PHP14,RP11-216L13.10,bA216L13.10 ) |
|---|---|
| Gene Full Name: | phosphohistidine phosphatase 1 |
| Band: | 9q34.3 |
| Quick Links | Entrez ID:29085; OMIM: 610167; Uniprot ID:PHP14_HUMAN; ENSEMBL ID: ENSG00000054148; HGNC ID: 30033 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.409834
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 9 / 70761 | 127 |  |
| blastocyst | 6 / 62319 | 96 | |
| fetus | 39 / 564012 | 69 | |
| neonate | 1 / 31097 | 32 |  |
| infant | 1 / 23620 | 42 | |
| juvenile | 2 / 55556 | 35 | |
| adult | 131 / 1939121 | 67 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 1 / 12794 | 78 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 4 / 94178 | 42 | |
| cervical tumor | 2 / 34366 | 58 | |
| chondrosarcoma | 3 / 82823 | 36 | |
| colorectal tumor | 9 / 114246 | 78 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 7 / 119369 | 58 | |
| germ cell tumor | 9 / 263845 | 34 | |
| glioma | 24 / 106883 | 224 |  |
| head and neck tumor | 5 / 136302 | 36 | |
| kidney tumor | 2 / 68959 | 29 | |
| leukemia | 6 / 95842 | 62 | |
| liver tumor | 4 / 96359 | 41 | |
| lung tumor | 3 / 103127 | 29 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 2 / 97250 | 20 | |
| normal | 255 / 3360307 | 75 | |
| ovarian tumor | 5 / 76682 | 65 | |
| pancreatic tumor | 4 / 104616 | 38 | |
| primitive neuroectodermal tumor of the CNS | 4 / 125680 | 31 | |
| prostate cancer | 3 / 102680 | 29 | |
| retinoblastoma | 4 / 46356 | 86 | |
| skin tumor | 10 / 124949 | 80 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 6 / 90257 | 66 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 5 / 33197 | 150 | |
| ascites | 6 / 40015 | 149 | |
| bladder | 0 / 29757 | 0 | |
| blood | 5 / 123478 | 40 | |
| bone | 4 / 71655 | 55 | |
| bone marrow | 2 / 48801 | 40 | |
| brain | 57 / 1100989 | 51 | |
| cervix | 2 / 48171 | 41 | |
| connective tissue | 2 / 149255 | 13 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 20 / 215722 | 92 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 23 / 211054 | 108 | |
| heart | 22 / 89626 | 245 | |
| intestine | 23 / 234472 | 98 | |
| kidney | 17 / 211777 | 80 | |
| larynx | 0 / 24145 | 0 | |
| liver | 14 / 207743 | 67 | |
| lung | 21 / 336974 | 62 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 2 / 91610 | 21 | |
| mammary gland | 10 / 153271 | 65 | |
| mouth | 1 / 67052 | 14 | |
| muscle | 11 / 107715 | 102 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 6 / 102051 | 58 | |
| pancreas | 8 / 214812 | 37 | |
| parathyroid | 8 / 20539 | 389 | |
| pharynx | 5 / 41328 | 120 | |
| pituitary gland | 4 / 16585 | 241 | |
| placenta | 19 / 280825 | 67 | |
| prostate | 11 / 189345 | 58 | |
| salivary gland | 1 / 20155 | 49 | |
| skin | 33 / 210574 | 156 | |
| spleen | 4 / 53952 | 74 | |
| stomach | 4 / 96619 | 41 | |
| testis | 11 / 330442 | 33 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 4 / 47473 | 84 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 16 / 232878 | 68 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_24_P184031
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 10.64 ± 0.21 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 10.65 ± 0.06 | |
| Basal Part of Pons | 10.77 ± 0.31 | |
| Cerebellar Cortex | 10.28 ± 0.17 | |
| Cerebellar Nuclei | 10.79 ± 0.2 | |
| Claustrum | 10.25 ± 0.5 | |
| Epithalamus | 10.84 ± 0.12 | |
| Frontal Lobe | 10.64 ± 0.28 | |
| Globus Pallidus | 11.19 ± 0.26 | |
| Hypothalamus | 10.78 ± 0.18 | |
| Insula | 10.82 ± 0.26 | |
| Limbic Lobe | 10.37 ± 0.44 | |
| Mesencephalon | 10.54 ± 0.35 | |
| Myelencephalon | 10.55 ± 0.32 | |
| Occipital Lobe | 10.1 ± 0.37 | |
| Parietal Lobe | 10.49 ± 0.32 | |
| Pontine Tegmentum | 10.54 ± 0.28 | |
| Striatum | 10.71 ± 0.27 | |
| Subthalamus | 10.74 ± 0.03 | |
| Temporal Lobe | 10.68 ± 0.32 | |
| Thalamus | 10.58 ± 0.2 | |
| White Matter | 10.73 ± 0.39 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Phpt1 | CB | Cerebellum | 10.19 | |
| 12.38 | | |||
| Phpt1 | CTX | Cerebral cortex | 12.1 | |
| 9.03 | | |||
| Phpt1 | HIP | Hippocampal region | 8.25 | |
| 8.29 | | |||
| Phpt1 | HPF | Hippocampal formation | 7.77 | |
| 7.22 | | |||
| Phpt1 | HY | Hypothalamus | 1.32 | |
| 1.18 | | |||
| Phpt1 | LSX | Lateral septal complex | 0.8 | |
| 0.87 | | |||
| Phpt1 | MB | Midbrain | 4.09 | |
| 4.43 | | |||
| Phpt1 | MY | Medulla | 7.97 | |
| 9.31 | | |||
| Phpt1 | OLF | Olfactory bulb | 17.98 | |
| 13.86 | | |||
| Phpt1 | P | Pons | 6.18 | |
| 7.8 | | |||
| Phpt1 | PAL | Pallidum | 2.5 | |
| 2.4 | | |||
| Phpt1 | RHP | Retrohippocampal region | 6.74 | |
| 5.32 | | |||
| Phpt1 | sAMY | Striatum-like amygdalar nuclei | 5.79 | |
| 4.1 | | |||
| Phpt1 | STR | Striatum | 3.19 | |
| 2.49 | | |||
| Phpt1 | STRd | Striatum dorsal region | 2.88 | |
| 2.42 | | |||
| Phpt1 | STRv | Striatum ventral region | 3.78 | |
| 2.48 | | |||
| Phpt1 | TH | Thalamus | 3.51 | |
| 3.28 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00034711 | 20 | 89 | 108 | HVYGYSMAYGPAQHAISTEK | Peptide Atlas |
| PHP14_HUMAN_0 | 0 | 0 | 0 | IHVYGYSMAYGPAQHAISTEK | PRIDE |
| PHP14_HUMAN_110 | 15 | 110 | 124 | AKYPDYEVTWANDGY | PRIDE |
| PHP14_HUMAN_2 | 25 | 2 | 26 | AVADLALIPDVDIDSDGVFKYVLIR | PRIDE |
| PHP14_HUMAN_33 | 13 | 33 | 45 | SGAPAAESKEIVR | PRIDE |
| PHP14_HUMAN_48 | 18 | 48 | 65 | WAEYHADIYDKVSGDMQK | PRIDE |
| PHP14_HUMAN_87 | 21 | 87 | 107 | IHVYGYSMAYGPAQHAISTEK | PRIDE |