AutismKB 2.0

Annotation Detail for GSTM1


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Basic Information Top
Gene Symbol:GSTM1 ( GST1,GSTM1-1,GSTM1a-1a,GSTM1b-1b,GTH4,GTM1,H-B,MGC26563,MU,MU-1 )
Gene Full Name: glutathione S-transferase mu 1
Band: 1p13.3
Quick LinksEntrez ID:2944; OMIM: 138350; Uniprot ID:GSTM1_HUMAN; ENSEMBL ID: ENSG00000134184; HGNC ID: 4632
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body1 / 7076114
blastocyst1 / 6231916
fetus12 / 56401221
neonate0 / 310970 
infant0 / 236200 
juvenile1 / 5555617
adult51 / 193912126
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma1 / 1747557
breast (mammary gland) tumor7 / 9417874
cervical tumor0 / 343660 
chondrosarcoma4 / 8282348
colorectal tumor0 / 1142460 
esophageal tumor1 / 1729057
gastrointestinal tumor3 / 11936925
germ cell tumor1 / 2638453
glioma0 / 1068830 
head and neck tumor1 / 1363027
kidney tumor0 / 689590 
leukemia0 / 958420 
liver tumor1 / 9635910
lung tumor5 / 10312748
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal58 / 336030717
ovarian tumor3 / 7668239
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS1 / 1256807
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor3 / 9025733
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder1 / 2975733
blood0 / 1234780 
bone2 / 7165527
bone marrow0 / 488010 
brain29 / 110098926
cervix0 / 481710 
connective tissue1 / 1492556
ear0 / 162120 
embryonic tissue3 / 21572213
esophagus1 / 2020949
eye3 / 21105414
heart3 / 8962633
intestine0 / 2344720 
kidney1 / 2117774
larynx0 / 241450 
liver5 / 20774324
lung9 / 33697426
lymph0 / 442700 
lymph node0 / 916100 
mammary gland7 / 15327145
mouth0 / 670520 
muscle0 / 1077150 
nerve1 / 1576863
ovary3 / 10205129
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx1 / 4132824
pituitary gland0 / 165850 
placenta0 / 2808250 
prostate3 / 18934515
salivary gland0 / 201550 
skin0 / 2105740 
spleen1 / 5395218
stomach3 / 9661931
testis8 / 33044224
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus3 / 23287812
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 204418_x_at
Cell line Expression level Expression bar
721_B_lymphoblasts175.5
Adipocyte82.8
AdrenalCortex78.3
Adrenalgland290.75
Amygdala216.05
Appendix91.8
AtrioventricularNode61.75
BDCA4+_DentriticCells444.35
Bonemarrow75.5
BronchialEpithelialCells42.05
CD105+_Endothelial96.8
CD14+_Monocytes24.4
CD19+_BCells(neg._sel.)31.65
CD33+_Myeloid99.1
CD34+170.75
CD4+_Tcells135.3
CD56+_NKCells147.65
CD71+_EarlyErythroid61.95
CD8+_Tcells127.15
CardiacMyocytes65.7
Caudatenucleus316.05
Cerebellum135.95
CerebellumPeduncles128.45
CiliaryGanglion37.4
CingulateCortex72.65
Colorectaladenocarcinoma57.45
DorsalRootGanglion86.6
FetalThyroid206.45
Fetalbrain91.35
Fetalliver67.8
Fetallung110.55
GlobusPallidus59.55
Heart360.1
Hypothalamus218.3
Kidney139.4
Leukemia_chronicMyelogenousK-56250.5
Leukemia_promyelocytic-HL-6044.7
Leukemialymphoblastic(MOLT-4)308.95
Liver7529.2
Lung78.85
Lymphnode122.85
Lymphoma_burkitts(Daudi)103.5
Lymphoma_burkitts(Raji)92.9
MedullaOblongata78.65
OccipitalLobe104.9
OlfactoryBulb224.15
Ovary248.15
Pancreas55.6
PancreaticIslet86.7
ParietalLobe86.7
Pituitary166.1
Placenta75.5
Pons137.55
PrefrontalCortex433.25
Prostate263.5
Salivarygland64.95
SkeletalMuscle157.55
Skin45.2
SmoothMuscle77.9
Spinalcord332.7
SubthalamicNucleus62.3
SuperiorCervicalGanglion91.1
TemporalLobe75.2
Testis257.2
TestisGermCell313.1
TestisIntersitial53.2
TestisLeydigCell110.95
TestisSeminiferousTubule86.95
Thalamus159.95
Thymus121.4
Thyroid159.15
Tongue80.65
Tonsil75.65
Trachea70.8
TrigeminalGanglion88.25
Uterus169.45
UterusCorpus133.35
WholeBlood69.35
Wholebrain200.9
colon74.45
pineal_day417.96
pineal_night526.86
retina553.575
small_intestine91.1
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P217917
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala7.7 ± 0.38
Basal Forebrain7.81 ± 0.07
Basal Part of Pons7.34 ± 0.3
Cerebellar Cortex7.15 ± 0.5
Cerebellar Nuclei7.47 ± 0.26
Claustrum7.27 ± 0.31
Epithalamus7.58 ± 0.18
Frontal Lobe7.28 ± 0.33
Globus Pallidus8.17 ± 0.27
Hypothalamus7.81 ± 0.21
Insula7.19 ± 0.37
Limbic Lobe7.1 ± 0.41
Mesencephalon7.48 ± 0.31
Myelencephalon7.44 ± 0.3
Occipital Lobe7.38 ± 0.28
Parietal Lobe7.44 ± 0.35
Pontine Tegmentum7.44 ± 0.36
Striatum8.01 ± 0.42
Subthalamus7.48 ± 0.21
Temporal Lobe7.3 ± 0.29
Thalamus7.55 ± 0.27
White Matter7.44 ± 0.35
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Gstm1CBCerebellum27.17
45.32
Gstm1CTXCerebral cortex25.62
18.35
Gstm1HIPHippocampal region23.04
26.87
Gstm1HPFHippocampal formation24.96
24.73
Gstm1HYHypothalamus2
1.48
Gstm1LSXLateral septal complex4.03
3.28
Gstm1MBMidbrain3.13
4.14
Gstm1MYMedulla11.06
13.22
Gstm1OLFOlfactory bulb31.41
25.99
Gstm1PPons5.88
7.36
Gstm1PALPallidum5.12
4.35
Gstm1RHPRetrohippocampal region29.28
22.01
Gstm1sAMYStriatum-like amygdalar nuclei20.75
16.62
Gstm1STRStriatum13.01
11.82
Gstm1STRdStriatum dorsal region12.2
12.48
Gstm1STRvStriatum ventral region13.91
9.17
Gstm1THThalamus7.52
7.9
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
GSTM1_HUMAN_126 10 126 135 YLEELPEKLK PRIDE
GSTM1_HUMAN_136 8 136 143 LYSEFLGK PRIDE
GSTM1_HUMAN_18 13 18 30 LLLEYTDSSYEEK PRIDE
GSTM1_HUMAN_202 9 202 210 FLPRPVFSK PRIDE
GSTM1_HUMAN_31 12 31 42 KYTMGDAPDYDR PRIDE
GSTM1_HUMAN_50 19 50 68 FKLGLDFPNLPYLIDGAHK PRIDE
GSTM1_HUMAN_52 17 52 68 LGLDFPNLPYLIDGAHK PRIDE
GSTM1_HUMAN_69 13 69 81 ITQSNAILCYIAR PRIDE
GSTM1_HUMAN_82 14 82 95 KHNLCGETEEEKIR PRIDE
GSTM1_HUMAN_83 13 83 95 HNLCGETEEEKIR PRIDE
PAp00041157 12 83 94 KHNLCGETEEEK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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