Annotation Detail for ZDHHC1
Basic Information Top
| Gene Symbol: | ZDHHC1 ( C16orf1,HSU90653,ZNF377 ) |
|---|---|
| Gene Full Name: | zinc finger, DHHC-type containing 1 |
| Band: | 16q22.1 |
| Quick Links | Entrez ID:29800; OMIM: NA; Uniprot ID:ZDHC1_HUMAN; ENSEMBL ID: ENSG00000159714; HGNC ID: 17916 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.658333
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 7 / 564012 | 12 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 31 / 1939121 | 15 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 4 / 82823 | 48 | |
| colorectal tumor | 1 / 114246 | 8 |  |
| esophageal tumor | 1 / 17290 | 57 |  |
| gastrointestinal tumor | 3 / 119369 | 25 | |
| germ cell tumor | 1 / 263845 | 3 | |
| glioma | 1 / 106883 | 9 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 2 / 68959 | 29 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 1 / 103127 | 9 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 36 / 3360307 | 10 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 5 / 104616 | 47 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 1 / 124949 | 8 | |
| soft tissue/muscle tissue tumor | 3 / 125191 | 23 | |
| uterine tumor | 3 / 90257 | 33 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 2 / 40015 | 49 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 3 / 71655 | 41 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 8 / 1100989 | 7 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 1 / 215722 | 4 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 4 / 211054 | 18 | |
| heart | 0 / 89626 | 0 | |
| intestine | 3 / 234472 | 12 | |
| kidney | 5 / 211777 | 23 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 14 / 336974 | 41 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 0 / 153271 | 0 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 8 / 214812 | 37 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 7 / 280825 | 24 | |
| prostate | 3 / 189345 | 15 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 1 / 210574 | 4 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 1 / 96619 | 10 | |
| testis | 2 / 330442 | 6 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 6 / 232878 | 25 | |
| vascular | 1 / 51780 | 19 | |
Microarray in - Probe name: CUST_8546_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 3.8 ± 0.87 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 3.18 ± 0.39 | |
| Basal Part of Pons | 3.39 ± 0.45 | |
| Cerebellar Cortex | 3.39 ± 0.64 | |
| Cerebellar Nuclei | 3.7 ± 1.09 | |
| Claustrum | 3.79 ± 0.79 | |
| Epithalamus | 2.82 ± 0.63 | |
| Frontal Lobe | 3.33 ± 0.77 | |
| Globus Pallidus | 3.58 ± 0.54 | |
| Hypothalamus | 3.36 ± 0.66 | |
| Insula | 3.19 ± 0.79 | |
| Limbic Lobe | 3.52 ± 0.76 | |
| Mesencephalon | 3.49 ± 0.85 | |
| Myelencephalon | 3.36 ± 0.74 | |
| Occipital Lobe | 3.53 ± 0.85 | |
| Parietal Lobe | 3.32 ± 0.81 | |
| Pontine Tegmentum | 3.23 ± 0.73 | |
| Striatum | 3.52 ± 0.87 | |
| Subthalamus | 3.14 ± 0.72 | |
| Temporal Lobe | 3.3 ± 0.81 | |
| Thalamus | 3.26 ± 0.83 | |
| White Matter | 2.72 ± 0.64 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Zdhhc1 | CB | Cerebellum | 4.06 | |
| 7.2 | | |||
| Zdhhc1 | CTX | Cerebral cortex | 0.98 | |
| 1.12 | | |||
| Zdhhc1 | HIP | Hippocampal region | 1.17 | |
| 1.18 | | |||
| Zdhhc1 | HPF | Hippocampal formation | 1.31 | |
| 1.35 | | |||
| Zdhhc1 | HY | Hypothalamus | 0.32 | |
| 0.45 | | |||
| Zdhhc1 | LSX | Lateral septal complex | 0.64 | |
| 0.75 | | |||
| Zdhhc1 | MB | Midbrain | 1.4 | |
| 2.01 | | |||
| Zdhhc1 | MY | Medulla | 1.99 | |
| 2.42 | | |||
| Zdhhc1 | OLF | Olfactory bulb | 1.43 | |
| 2.34 | | |||
| Zdhhc1 | P | Pons | 1.36 | |
| 1.55 | | |||
| Zdhhc1 | PAL | Pallidum | 0.29 | |
| 0.3 | | |||
| Zdhhc1 | RHP | Retrohippocampal region | 1.63 | |
| 1.69 | | |||
| Zdhhc1 | sAMY | Striatum-like amygdalar nuclei | 0.32 | |
| 0.23 | | |||
| Zdhhc1 | STR | Striatum | 0.43 | |
| 0.43 | | |||
| Zdhhc1 | STRd | Striatum dorsal region | 0.49 | |
| 0.5 | | |||
| Zdhhc1 | STRv | Striatum ventral region | 0.27 | |
| 0.23 | | |||
| Zdhhc1 | TH | Thalamus | 0.35 | |
| 0.36 | |