AutismKB 2.0

Annotation Detail for C12orf24


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Basic Information Top
Gene Symbol:C12orf24 ( HSU79274 )
Gene Full Name: chromosome 12 open reading frame 24
Band: 12q24.11
Quick LinksEntrez ID:29902; OMIM: NA; Uniprot ID:CL024_HUMAN; ENSEMBL ID: ENSG00000204856; HGNC ID:
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst3 / 6231948
fetus15 / 56401226
neonate1 / 3109732
infant1 / 2362042
juvenile0 / 555560 
adult40 / 193912120
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor1 / 1279478
bladder carcinoma0 / 174750 
breast (mammary gland) tumor5 / 9417853
cervical tumor1 / 3436629
chondrosarcoma3 / 8282336
colorectal tumor2 / 11424617
esophageal tumor0 / 172900 
gastrointestinal tumor1 / 1193698
germ cell tumor11 / 26384541
glioma3 / 10688328
head and neck tumor5 / 13630236
kidney tumor2 / 6895929
leukemia7 / 9584273
liver tumor2 / 9635920
lung tumor2 / 10312719
lymphoma5 / 7175569
non-neoplasia0 / 972500 
normal73 / 336030721
ovarian tumor4 / 7668252
pancreatic tumor3 / 10461628
primitive neuroectodermal tumor of the CNS10 / 12568079
prostate cancer7 / 10268068
retinoblastoma2 / 4635643
skin tumor6 / 12494948
soft tissue/muscle tissue tumor3 / 12519123
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland3 / 3319790
ascites1 / 4001524
bladder0 / 297570 
blood9 / 12347872
bone2 / 7165527
bone marrow2 / 4880140
brain28 / 110098925
cervix3 / 4817162
connective tissue1 / 1492556
ear0 / 162120 
embryonic tissue5 / 21572223
esophagus0 / 202090 
eye3 / 21105414
heart1 / 8962611
intestine3 / 23447212
kidney4 / 21177718
larynx0 / 241450 
liver5 / 20774324
lung3 / 3369748
lymph1 / 4427022
lymph node4 / 9161043
mammary gland5 / 15327132
mouth5 / 6705274
muscle2 / 10771518
nerve0 / 157680 
ovary4 / 10205139
pancreas3 / 21481213
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta0 / 2808250 
prostate9 / 18934547
salivary gland0 / 201550 
skin6 / 21057428
spleen1 / 5395218
stomach1 / 9661910
testis24 / 33044272
thymus5 / 8113161
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord1 / 1368073
uterus4 / 23287817
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 204521_at
Cell line Expression level Expression bar
721_B_lymphoblasts148.8
Adipocyte10.35
AdrenalCortex11.95
Adrenalgland8.95
Amygdala50.5
Appendix11.75
AtrioventricularNode8.85
BDCA4+_DentriticCells11.35
Bonemarrow11.1
BronchialEpithelialCells14.65
CD105+_Endothelial17.05
CD14+_Monocytes12.95
CD19+_BCells(neg._sel.)14.75
CD33+_Myeloid15.35
CD34+73.65
CD4+_Tcells12.05
CD56+_NKCells13
CD71+_EarlyErythroid9.85
CD8+_Tcells10.55
CardiacMyocytes16.85
Caudatenucleus28.5
Cerebellum23.1
CerebellumPeduncles35.55
CiliaryGanglion8.05
CingulateCortex35.35
Colorectaladenocarcinoma41.9
DorsalRootGanglion9.65
FetalThyroid10.7
Fetalbrain29.85
Fetalliver9.2
Fetallung7.85
GlobusPallidus11.7
Heart14.05
Hypothalamus62
Kidney8.85
Leukemia_chronicMyelogenousK-56232.8
Leukemia_promyelocytic-HL-60426.15
Leukemialymphoblastic(MOLT-4)63.55
Liver14.05
Lung9.35
Lymphnode9.8
Lymphoma_burkitts(Daudi)168.65
Lymphoma_burkitts(Raji)354.85
MedullaOblongata42.95
OccipitalLobe28.7
OlfactoryBulb8.7
Ovary7.3
Pancreas6.35
PancreaticIslet11.25
ParietalLobe24.95
Pituitary13
Placenta10.5
Pons21
PrefrontalCortex78.2
Prostate13.15
Salivarygland8.55
SkeletalMuscle12.85
Skin8.55
SmoothMuscle13.55
Spinalcord15.05
SubthalamicNucleus34.1
SuperiorCervicalGanglion13.6
TemporalLobe33.4
Testis262.8
TestisGermCell180.15
TestisIntersitial259.25
TestisLeydigCell197.55
TestisSeminiferousTubule178.75
Thalamus35.4
Thymus9.75
Thyroid12.8
Tongue11.1
Tonsil10.35
Trachea8.8
TrigeminalGanglion11.7
Uterus8.85
UterusCorpus8.65
WholeBlood11.35
Wholebrain138.3
colon10.8
pineal_day13.18
pineal_night13.98
retina13.225
small_intestine10.75
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_463_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala6.95 ± 0.34
Basal Forebrain6.78 ± 0.17
Basal Part of Pons7.28 ± 0.25
Cerebellar Cortex7.4 ± 0.14
Cerebellar Nuclei7.49 ± 0.46
Claustrum6.5 ± 0.39
Epithalamus6.69 ± 0.25
Frontal Lobe7.24 ± 0.37
Globus Pallidus6.52 ± 0.32
Hypothalamus7.56 ± 0.25
Insula7.1 ± 0.2
Limbic Lobe7.01 ± 0.44
Mesencephalon7.02 ± 0.43
Myelencephalon7 ± 0.46
Occipital Lobe7.15 ± 0.38
Parietal Lobe7.31 ± 0.42
Pontine Tegmentum7.14 ± 0.36
Striatum6.58 ± 0.34
Subthalamus7.09 ± 0.31
Temporal Lobe7.06 ± 0.32
Thalamus7.08 ± 0.28
White Matter5.84 ± 0.25
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
1500011H22RikCBCerebellum34.17
49.21
1500011H22RikCTXCerebral cortex100
92.27
1500011H22RikHIPHippocampal region83.94
100
1500011H22RikHPFHippocampal formation80
100
1500011H22RikHYHypothalamus56.27
52.83
1500011H22RikLSXLateral septal complex87.38
73.11
1500011H22RikMBMidbrain53.69
56.32
1500011H22RikMYMedulla50.26
62.95
1500011H22RikOLFOlfactory bulb74.54
71.15
1500011H22RikPPons44.79
56.31
1500011H22RikPALPallidum52.15
55.19
1500011H22RikRHPRetrohippocampal region75.48
75.1
1500011H22RiksAMYStriatum-like amygdalar nuclei51.65
42.07
1500011H22RikSTRStriatum72.14
58.69
1500011H22RikSTRdStriatum dorsal region69.59
55.69
1500011H22RikSTRvStriatum ventral region90.86
75.05
1500011H22RikTHThalamus63.43
65.42
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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