Annotation Detail for ANAPC4
Basic Information Top
| Gene Symbol: | ANAPC4 ( APC4 ) |
|---|---|
| Gene Full Name: | anaphase promoting complex subunit 4 |
| Band: | 4p15.2 |
| Quick Links | Entrez ID:29945; OMIM: 606947; Uniprot ID:APC4_HUMAN; ENSEMBL ID: ENSG00000053900; HGNC ID: 19990 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.152173
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 2 / 70761 | 28 |  |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 15 / 564012 | 26 | |
| neonate | 0 / 31097 | 0 | |
| infant | 2 / 23620 | 84 |  |
| juvenile | 1 / 55556 | 17 | |
| adult | 79 / 1939121 | 40 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 1 / 12794 | 78 | |
| bladder carcinoma | 1 / 17475 | 57 | |
| breast (mammary gland) tumor | 5 / 94178 | 53 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 3 / 82823 | 36 | |
| colorectal tumor | 3 / 114246 | 26 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 2 / 119369 | 16 | |
| germ cell tumor | 6 / 263845 | 22 | |
| glioma | 2 / 106883 | 18 | |
| head and neck tumor | 3 / 136302 | 22 | |
| kidney tumor | 3 / 68959 | 43 | |
| leukemia | 1 / 95842 | 10 |  |
| liver tumor | 4 / 96359 | 41 | |
| lung tumor | 1 / 103127 | 9 | |
| lymphoma | 2 / 71755 | 27 | |
| non-neoplasia | 9 / 97250 | 92 | |
| normal | 94 / 3360307 | 27 | |
| ovarian tumor | 3 / 76682 | 39 | |
| pancreatic tumor | 2 / 104616 | 19 | |
| primitive neuroectodermal tumor of the CNS | 4 / 125680 | 31 | |
| prostate cancer | 2 / 102680 | 19 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 1 / 124949 | 8 | |
| soft tissue/muscle tissue tumor | 6 / 125191 | 47 | |
| uterine tumor | 14 / 90257 | 155 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 2 / 13106 | 152 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 1 / 29757 | 33 | |
| blood | 1 / 123478 | 8 | |
| bone | 4 / 71655 | 55 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 29 / 1100989 | 26 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 6 / 149255 | 40 | |
| ear | 1 / 16212 | 61 | |
| embryonic tissue | 2 / 215722 | 9 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 3 / 211054 | 14 | |
| heart | 8 / 89626 | 89 | |
| intestine | 7 / 234472 | 29 | |
| kidney | 9 / 211777 | 42 | |
| larynx | 1 / 24145 | 41 | |
| liver | 6 / 207743 | 28 | |
| lung | 5 / 336974 | 14 | |
| lymph | 2 / 44270 | 45 | |
| lymph node | 4 / 91610 | 43 | |
| mammary gland | 10 / 153271 | 65 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 3 / 102051 | 29 | |
| pancreas | 8 / 214812 | 37 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 18 / 280825 | 64 | |
| prostate | 3 / 189345 | 15 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 2 / 210574 | 9 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 3 / 96619 | 31 | |
| testis | 4 / 330442 | 12 | |
| thymus | 3 / 81131 | 36 | |
| thyroid | 2 / 47473 | 42 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 5 / 52413 | 95 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 18 / 232878 | 77 | |
| vascular | 1 / 51780 | 19 | |
Microarray in - Probe name: CUST_5522_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 7.61 ± 0.28 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 7.64 ± 0.18 | |
| Basal Part of Pons | 7.69 ± 0.22 | |
| Cerebellar Cortex | 7.83 ± 0.16 | |
| Cerebellar Nuclei | 7.51 ± 0.25 | |
| Claustrum | 7.31 ± 0.42 | |
| Epithalamus | 7.97 ± 0.28 | |
| Frontal Lobe | 7.64 ± 0.27 | |
| Globus Pallidus | 7.62 ± 0.13 | |
| Hypothalamus | 7.62 ± 0.19 | |
| Insula | 7.74 ± 0.17 | |
| Limbic Lobe | 7.63 ± 0.24 | |
| Mesencephalon | 7.6 ± 0.24 | |
| Myelencephalon | 7.63 ± 0.28 | |
| Occipital Lobe | 7.86 ± 0.32 | |
| Parietal Lobe | 7.65 ± 0.25 | |
| Pontine Tegmentum | 7.67 ± 0.27 | |
| Striatum | 7.37 ± 0.27 | |
| Subthalamus | 7.95 ± 0.09 | |
| Temporal Lobe | 7.79 ± 0.22 | |
| Thalamus | 7.55 ± 0.27 | |
| White Matter | 8.21 ± 0.09 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Anapc4 | CB | Cerebellum | 7.07 | |
| 7.73 | | |||
| Anapc4 | CTX | Cerebral cortex | 25.68 | |
| 19.03 | | |||
| Anapc4 | HIP | Hippocampal region | 45.67 | |
| 57.66 | | |||
| Anapc4 | HPF | Hippocampal formation | 45.5 | |
| 49.52 | | |||
| Anapc4 | HY | Hypothalamus | 37.28 | |
| 32.18 | | |||
| Anapc4 | LSX | Lateral septal complex | 16.84 | |
| 12.31 | | |||
| Anapc4 | MB | Midbrain | 18.68 | |
| 18.9 | | |||
| Anapc4 | MY | Medulla | 10.65 | |
| 16.69 | | |||
| Anapc4 | OLF | Olfactory bulb | 23.15 | |
| 19.76 | | |||
| Anapc4 | P | Pons | 20.65 | |
| 27.15 | | |||
| Anapc4 | PAL | Pallidum | 25.39 | |
| 24.59 | | |||
| Anapc4 | RHP | Retrohippocampal region | 45.9 | |
| 36.47 | | |||
| Anapc4 | sAMY | Striatum-like amygdalar nuclei | 42.75 | |
| 33.01 | | |||
| Anapc4 | STR | Striatum | 15.71 | |
| 11.91 | | |||
| Anapc4 | STRd | Striatum dorsal region | 8.64 | |
| 6.31 | | |||
| Anapc4 | STRv | Striatum ventral region | 21.9 | |
| 16.3 | | |||
| Anapc4 | TH | Thalamus | 21.3 | |
| 16.89 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00069824 | 16 | 604 | 619 | HTDISQSVSNGLIAIK | Peptide Atlas |