AutismKB 2.0

Annotation Detail for H1F0


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Basic Information Top
Gene Symbol:H1F0 ( H10,H1FV,MGC5241 )
Gene Full Name: H1 histone family, member 0
Band: 22q13.1
Quick LinksEntrez ID:3005; OMIM: 142708; Uniprot ID:H10_HUMAN; ENSEMBL ID: ENSG00000189060; HGNC ID: 4714
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body12 / 70761169
blastocyst13 / 62319208
fetus148 / 564012262
neonate2 / 3109764
infant4 / 23620169
juvenile7 / 55556125
adult245 / 1939121126
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor17 / 94178180
cervical tumor4 / 34366116
chondrosarcoma11 / 82823132
colorectal tumor16 / 114246140
esophageal tumor13 / 17290751
gastrointestinal tumor13 / 119369108
germ cell tumor45 / 263845170
glioma32 / 106883299
head and neck tumor12 / 13630288
kidney tumor3 / 6895943
leukemia17 / 95842177
liver tumor18 / 96359186
lung tumor6 / 10312758
lymphoma1 / 7175513
non-neoplasia8 / 9725082
normal406 / 3360307120
ovarian tumor7 / 7668291
pancreatic tumor8 / 10461676
primitive neuroectodermal tumor of the CNS27 / 125680214
prostate cancer6 / 10268058
retinoblastoma0 / 463560 
skin tumor4 / 12494932
soft tissue/muscle tissue tumor23 / 125191183
uterine tumor6 / 9025766
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue4 / 13106305
adrenal gland2 / 3319760
ascites0 / 400150 
bladder2 / 2975767
blood17 / 123478137
bone19 / 71655265
bone marrow3 / 4880161
brain183 / 1100989166
cervix5 / 48171103
connective tissue11 / 14925573
ear0 / 162120 
embryonic tissue40 / 215722185
esophagus13 / 20209643
eye10 / 21105447
heart6 / 8962666
intestine36 / 234472153
kidney17 / 21177780
larynx3 / 24145124
liver50 / 207743240
lung27 / 33697480
lymph0 / 442700 
lymph node4 / 9161043
mammary gland27 / 153271176
mouth7 / 67052104
muscle23 / 107715213
nerve1 / 1576863
ovary6 / 10205158
pancreas8 / 21481237
parathyroid1 / 2053948
pharynx0 / 413280 
pituitary gland1 / 1658560
placenta63 / 280825224
prostate13 / 18934568
salivary gland5 / 20155248
skin6 / 21057428
spleen5 / 5395292
stomach8 / 9661982
testis32 / 33044296
thymus20 / 81131246
thyroid3 / 4747363
tonsil0 / 169990 
trachea8 / 52413152
umbilical cord0 / 136800 
uterus39 / 232878167
vascular4 / 5178077
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 208886_at
Cell line Expression level Expression bar
721_B_lymphoblasts19.4
Adipocyte61.2
AdrenalCortex54.55
Adrenalgland61.1
Amygdala80.6
Appendix72.75
AtrioventricularNode54
BDCA4+_DentriticCells145
Bonemarrow195.65
BronchialEpithelialCells118.25
CD105+_Endothelial726.4
CD14+_Monocytes68.25
CD19+_BCells(neg._sel.)51.2
CD33+_Myeloid95.65
CD34+181.6
CD4+_Tcells26.05
CD56+_NKCells48.15
CD71+_EarlyErythroid1562.35
CD8+_Tcells19.05
CardiacMyocytes69.05
Caudatenucleus65.15
Cerebellum75.25
CerebellumPeduncles107.5
CiliaryGanglion50.15
CingulateCortex77.6
Colorectaladenocarcinoma684
DorsalRootGanglion54.85
FetalThyroid288.2
Fetalbrain137.65
Fetalliver174.8
Fetallung188.35
GlobusPallidus52.75
Heart52.65
Hypothalamus82.1
Kidney61.35
Leukemia_chronicMyelogenousK-56237
Leukemia_promyelocytic-HL-6038.9
Leukemialymphoblastic(MOLT-4)60.05
Liver94.9
Lung82.15
Lymphnode45.65
Lymphoma_burkitts(Daudi)63.4
Lymphoma_burkitts(Raji)81.2
MedullaOblongata67.9
OccipitalLobe66.1
OlfactoryBulb59.9
Ovary75.8
Pancreas76.5
PancreaticIslet91.65
ParietalLobe63.75
Pituitary106.7
Placenta85.3
Pons69.1
PrefrontalCortex140.4
Prostate359.45
Salivarygland57.85
SkeletalMuscle65
Skin61.05
SmoothMuscle83.25
Spinalcord78.3
SubthalamicNucleus56.6
SuperiorCervicalGanglion80.75
TemporalLobe66.35
Testis62.15
TestisGermCell62.5
TestisIntersitial53.1
TestisLeydigCell55.95
TestisSeminiferousTubule55.65
Thalamus74.3
Thymus109.4
Thyroid195.9
Tongue70.8
Tonsil70.35
Trachea76.45
TrigeminalGanglion70.75
Uterus78.3
UterusCorpus76.1
WholeBlood28.7
Wholebrain65.05
colon203
pineal_day92.02
pineal_night84.5
retina194.75
small_intestine145.15
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_10282_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala7.35 ± 0.5
Basal Forebrain7.1 ± 0.16
Basal Part of Pons7.4 ± 0.36
Cerebellar Cortex7.14 ± 0.34
Cerebellar Nuclei7.23 ± 0.28
Claustrum7.53 ± 0.62
Epithalamus6.53 ± 0.36
Frontal Lobe7.01 ± 0.41
Globus Pallidus7.24 ± 0.25
Hypothalamus6.85 ± 0.46
Insula6.98 ± 0.28
Limbic Lobe7.22 ± 0.45
Mesencephalon7.2 ± 0.42
Myelencephalon7.16 ± 0.45
Occipital Lobe7.29 ± 0.47
Parietal Lobe7.13 ± 0.39
Pontine Tegmentum6.93 ± 0.36
Striatum7.15 ± 0.45
Subthalamus7.28 ± 0.03
Temporal Lobe6.98 ± 0.42
Thalamus7.19 ± 0.36
White Matter7.07 ± 0.32
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
H1f0CBCerebellum100
100
H1f0CTXCerebral cortex100
100
H1f0HIPHippocampal region100
100
H1f0HPFHippocampal formation100
100
H1f0HYHypothalamus93.07
85.65
H1f0LSXLateral septal complex100
91.09
H1f0MBMidbrain97.14
100
H1f0MYMedulla96.67
100
H1f0OLFOlfactory bulb100
100
H1f0PPons88.26
100
H1f0PALPallidum97.93
100
H1f0RHPRetrohippocampal region100
100
H1f0sAMYStriatum-like amygdalar nuclei100
100
H1f0STRStriatum92.01
81.02
H1f0STRdStriatum dorsal region84.61
75.74
H1f0STRvStriatum ventral region85.96
68.4
H1f0THThalamus100
100
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
H10_HUMAN_1 14 1 14 TENSTSAPAAKPKR PRIDE
H10_HUMAN_27 13 27 39 YSDMIVAAIQAEK PRIDE
H10_HUMAN_82 12 82 93 QTKGVGASGSFR PRIDE
PAp00352750 9 86 94 GVGASGSFR Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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