Annotation Detail for HLA-DMA
Basic Information Top
| Gene Symbol: | HLA-DMA ( D6S222E,DMA,HLADM,RING6 ) |
|---|---|
| Gene Full Name: | major histocompatibility complex, class II, DM alpha |
| Band: | 6p21.32 |
| Quick Links | Entrez ID:3108; OMIM: 142855; Uniprot ID:Q31604_HUMAN; ENSEMBL ID: ENSG00000204257; HGNC ID: 4934 |
| Relate to Another Database: | SFARIGene; denovo-db |
Unigene EST- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 217478_s_at
| Cell line | Expression level | Expression bar |
|---|---|---|
 | ||
| 721_B_lymphoblasts | 519.35 |  |
| Adipocyte | 56.5 |  |
| AdrenalCortex | 3.85 |  |
| Adrenalgland | 68.45 | |
| Amygdala | 4.7 | |
| Appendix | 14.35 |  |
| AtrioventricularNode | 3.3 | |
| BDCA4+_DentriticCells | 2163.95 |  |
| Bonemarrow | 107 | |
| BronchialEpithelialCells | 3.4 | |
| CD105+_Endothelial | 95.55 | |
| CD14+_Monocytes | 1373.95 | |
| CD19+_BCells(neg._sel.) | 2302.85 | |
| CD33+_Myeloid | 1053 | |
| CD34+ | 670.85 | |
| CD4+_Tcells | 28.9 | |
| CD56+_NKCells | 188.3 | |
| CD71+_EarlyErythroid | 4.8 | |
| CD8+_Tcells | 36.7 | |
| CardiacMyocytes | 4.4 | |
| Caudatenucleus | 3.65 | |
| Cerebellum | 3.45 | |
| CerebellumPeduncles | 3.75 | |
| CiliaryGanglion | 6.85 | |
| CingulateCortex | 4.35 | |
| Colorectaladenocarcinoma | 4.5 | |
| DorsalRootGanglion | 8.5 | |
| FetalThyroid | 4.2 | |
| Fetalbrain | 3.25 | |
| Fetalliver | 3.6 | |
| Fetallung | 21 | |
| GlobusPallidus | 2.4 | |
| Heart | 287.5 | |
| Hypothalamus | 5.75 | |
| Kidney | 14.9 | |
| Leukemia_chronicMyelogenousK-562 | 2.95 | |
| Leukemia_promyelocytic-HL-60 | 356.8 | |
| Leukemialymphoblastic(MOLT-4) | 2.65 | |
| Liver | 6.4 | |
| Lung | 689.15 | |
| Lymphnode | 397.15 | |
| Lymphoma_burkitts(Daudi) | 293.7 | |
| Lymphoma_burkitts(Raji) | 854.25 | |
| MedullaOblongata | 3.9 | |
| OccipitalLobe | 3.05 | |
| OlfactoryBulb | 26.05 | |
| Ovary | 3.75 | |
| Pancreas | 5.95 | |
| PancreaticIslet | 87.95 | |
| ParietalLobe | 3.65 | |
| Pituitary | 5.8 | |
| Placenta | 13.6 | |
| Pons | 3.4 | |
| PrefrontalCortex | 5.15 | |
| Prostate | 6.5 | |
| Salivarygland | 241.5 | |
| SkeletalMuscle | 5.05 | |
| Skin | 3.35 | |
| SmoothMuscle | 3.8 | |
| Spinalcord | 26.85 | |
| SubthalamicNucleus | 3.25 | |
| SuperiorCervicalGanglion | 5.45 | |
| TemporalLobe | 4.35 | |
| Testis | 3.6 | |
| TestisGermCell | 5.8 | |
| TestisIntersitial | 4.15 | |
| TestisLeydigCell | 4.15 | |
| TestisSeminiferousTubule | 3.85 | |
| Thalamus | 4.35 | |
| Thymus | 158.9 | |
| Thyroid | 21.6 | |
| Tongue | 4.35 | |
| Tonsil | 641.55 | |
| Trachea | 143.75 | |
| TrigeminalGanglion | 4.8 | |
| Uterus | 13.3 | |
| UterusCorpus | 3.95 | |
| WholeBlood | 271.15 | |
| Wholebrain | 3.65 | |
| colon | 24.55 | |
| pineal_day | 7.6 | |
| pineal_night | 8.36 | |
| retina | 53.2 | |
| small_intestine | 258.4 | |
- Probe name: A_24_P50245
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 3.47 ± 0.65 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 3.34 ± 0.52 | |
| Basal Part of Pons | 4.03 ± 0.58 | |
| Cerebellar Cortex | 3.44 ± 0.53 | |
| Cerebellar Nuclei | 4.71 ± 0.39 | |
| Claustrum | 2.96 ± 0.52 | |
| Epithalamus | 4.71 ± 0.57 | |
| Frontal Lobe | 3.55 ± 0.7 | |
| Globus Pallidus | 5.27 ± 0.43 | |
| Hypothalamus | 4.02 ± 1.03 | |
| Insula | 3.71 ± 0.57 | |
| Limbic Lobe | 3.36 ± 0.66 | |
| Mesencephalon | 3.68 ± 0.68 | |
| Myelencephalon | 3.59 ± 0.76 | |
| Occipital Lobe | 3.24 ± 0.74 | |
| Parietal Lobe | 3.39 ± 0.73 | |
| Pontine Tegmentum | 3.37 ± 0.64 | |
| Striatum | 4.05 ± 0.67 | |
| Subthalamus | 4.1 ± 0.67 | |
| Temporal Lobe | 3.5 ± 0.72 | |
| Thalamus | 3.66 ± 0.59 | |
| White Matter | 4.57 ± 0.46 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| H2-DMa | CB | Cerebellum | 0 | |
| 0 | | |||
| H2-DMa | CTX | Cerebral cortex | 0 | |
| 0 | | |||
| H2-DMa | HIP | Hippocampal region | 0 | |
| 0 | | |||
| H2-DMa | HPF | Hippocampal formation | 0 | |
| 0 | | |||
| H2-DMa | HY | Hypothalamus | 0 | |
| 0 | | |||
| H2-DMa | LSX | Lateral septal complex | 0 | |
| 0 | | |||
| H2-DMa | MB | Midbrain | 0 | |
| 0 | | |||
| H2-DMa | MY | Medulla | 0 | |
| 0 | | |||
| H2-DMa | OLF | Olfactory bulb | 0 | |
| 0 | | |||
| H2-DMa | P | Pons | 0 | |
| 0 | | |||
| H2-DMa | PAL | Pallidum | 0 | |
| 0 | | |||
| H2-DMa | RHP | Retrohippocampal region | 0 | |
| 0 | | |||
| H2-DMa | sAMY | Striatum-like amygdalar nuclei | 0 | |
| 0 | | |||
| H2-DMa | STR | Striatum | 0 | |
| 0 | | |||
| H2-DMa | STRd | Striatum dorsal region | 0 | |
| 0 | | |||
| H2-DMa | STRv | Striatum ventral region | 0 | |
| 0 | | |||
| H2-DMa | TH | Thalamus | 0 | |
| 0 | |