AutismKB 2.0

Annotation Detail for HLA-H


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:HLA-H ( HLAHP )
Gene Full Name: major histocompatibility complex, class I, H (pseudogene)
Band: 6p22.1
Quick LinksEntrez ID:3136; OMIM: NA; Uniprot ID:; ENSEMBL ID: ; HGNC ID: 4965
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Microarray in BioGPS Top
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_7195_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala3.95 ± 0.76
Basal Forebrain3.85 ± 0.48
Basal Part of Pons4.13 ± 0.47
Cerebellar Cortex3.78 ± 0.52
Cerebellar Nuclei4.53 ± 0.6
Claustrum4.35 ± 0.67
Epithalamus4.41 ± 0.61
Frontal Lobe3.97 ± 0.71
Globus Pallidus5.44 ± 0.41
Hypothalamus3.61 ± 1.06
Insula3.92 ± 0.76
Limbic Lobe3.89 ± 0.71
Mesencephalon3.97 ± 0.68
Myelencephalon4.11 ± 0.59
Occipital Lobe4.17 ± 0.55
Parietal Lobe3.78 ± 0.7
Pontine Tegmentum4.08 ± 0.74
Striatum4.32 ± 0.56
Subthalamus3.03 ± 0.25
Temporal Lobe3.85 ± 0.66
Thalamus4.22 ± 0.55
White Matter4.57 ± 0.88
Mouse Brain ISH
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018