Annotation Detail for RAB37
Basic Information Top
| Gene Symbol: | RAB37 ( FLJ30284,FLJ32507 ) |
|---|---|
| Gene Full Name: | RAB37, member RAS oncogene family |
| Band: | 17q25.1 |
| Quick Links | Entrez ID:326624; OMIM: 609956; Uniprot ID:RAB37_HUMAN; ENSEMBL ID: ENSG00000172794; HGNC ID: 30268 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.351413
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 2 / 62319 | 32 |  |
| fetus | 5 / 564012 | 8 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 3 / 55556 | 53 |  |
| adult | 18 / 1939121 | 9 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 0 / 263845 | 0 | |
| glioma | 1 / 106883 | 9 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 12 / 95842 | 125 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 5 / 71755 | 69 | |
| non-neoplasia | 2 / 97250 | 20 | |
| normal | 78 / 3360307 | 23 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 2 / 104616 | 19 | |
| primitive neuroectodermal tumor of the CNS | 4 / 125680 | 31 | |
| prostate cancer | 4 / 102680 | 38 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 14 / 123478 | 113 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 5 / 48801 | 102 | |
| brain | 42 / 1100989 | 38 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 2 / 149255 | 13 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 2 / 215722 | 9 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 5 / 211054 | 23 | |
| heart | 0 / 89626 | 0 | |
| intestine | 4 / 234472 | 17 | |
| kidney | 4 / 211777 | 18 | |
| larynx | 0 / 24145 | 0 | |
| liver | 1 / 207743 | 4 | |
| lung | 6 / 336974 | 17 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 6 / 91610 | 65 | |
| mammary gland | 1 / 153271 | 6 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 2 / 214812 | 9 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 0 / 280825 | 0 | |
| prostate | 4 / 189345 | 21 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 0 / 210574 | 0 | |
| spleen | 4 / 53952 | 74 | |
| stomach | 0 / 96619 | 0 | |
| testis | 0 / 330442 | 0 | |
| thymus | 6 / 81131 | 73 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 1 / 16999 | 58 | |
| trachea | 1 / 52413 | 19 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 0 / 232878 | 0 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_23_P414654
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 5.65 ± 0.97 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 6.18 ± 0.54 | |
| Basal Part of Pons | 8.98 ± 0.27 | |
| Cerebellar Cortex | 8.31 ± 0.51 | |
| Cerebellar Nuclei | 8.07 ± 0.46 | |
| Claustrum | 8.08 ± 0.43 | |
| Epithalamus | 5.93 ± 0.9 | |
| Frontal Lobe | 7.34 ± 1.11 | |
| Globus Pallidus | 6.43 ± 0.4 | |
| Hypothalamus | 6.82 ± 0.72 | |
| Insula | 6.65 ± 0.51 | |
| Limbic Lobe | 6.8 ± 1.07 | |
| Mesencephalon | 6.9 ± 0.86 | |
| Myelencephalon | 7.15 ± 1.18 | |
| Occipital Lobe | 7.79 ± 0.65 | |
| Parietal Lobe | 7.66 ± 0.73 | |
| Pontine Tegmentum | 6.9 ± 0.77 | |
| Striatum | 4.97 ± 0.58 | |
| Subthalamus | 7.83 ± 0.3 | |
| Temporal Lobe | 6.81 ± 0.78 | |
| Thalamus | 7.93 ± 0.83 | |
| White Matter | 4.63 ± 0.73 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Rab37 | CB | Cerebellum | 2.56 | |
| 4.49 | | |||
| Rab37 | CTX | Cerebral cortex | 0.4 | |
| 0.66 | | |||
| Rab37 | HIP | Hippocampal region | 0.7 | |
| 1.13 | | |||
| Rab37 | HPF | Hippocampal formation | 0.61 | |
| 0.91 | | |||
| Rab37 | HY | Hypothalamus | 1.11 | |
| 1.3 | | |||
| Rab37 | LSX | Lateral septal complex | 0.38 | |
| 0.44 | | |||
| Rab37 | MB | Midbrain | 1.26 | |
| 1.87 | | |||
| Rab37 | MY | Medulla | 7.91 | |
| 10.1 | | |||
| Rab37 | OLF | Olfactory bulb | 15.56 | |
| 20.01 | | |||
| Rab37 | P | Pons | 8.13 | |
| 9.26 | | |||
| Rab37 | PAL | Pallidum | 1.84 | |
| 2.3 | | |||
| Rab37 | RHP | Retrohippocampal region | 0.35 | |
| 0.49 | | |||
| Rab37 | sAMY | Striatum-like amygdalar nuclei | 0.24 | |
| 0.27 | | |||
| Rab37 | STR | Striatum | 0.22 | |
| 0.24 | | |||
| Rab37 | STRd | Striatum dorsal region | 0.22 | |
| 0.25 | | |||
| Rab37 | STRv | Striatum ventral region | 0.22 | |
| 0.2 | | |||
| Rab37 | TH | Thalamus | 46.25 | |
| 55.43 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00097947 | 11 | 44 | 54 | LQIWDTAGQER | Peptide Atlas |
| RAB37_HUMAN_101 | 14 | 101 | 114 | DAQALLLLYDITNK | PRIDE |
| RAB37_HUMAN_80 | 11 | 80 | 90 | LQIWDTAGQER | PRIDE |