Annotation Detail for UBAC2
Basic Information Top
| Gene Symbol: | UBAC2 ( FLJ26351,FLJ30001,FLJ30548,FLJ42413,MGC90487,PHGDHL1 ) |
|---|---|
| Gene Full Name: | UBA domain containing 2 |
| Band: | 13q32.3 |
| Quick Links | Entrez ID:337867; OMIM: NA; Uniprot ID:UBAC2_HUMAN; ENSEMBL ID: ENSG00000134882; HGNC ID: 20486 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.508545
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 6 / 70761 | 84 |  |
| blastocyst | 5 / 62319 | 80 | |
| fetus | 41 / 564012 | 72 | |
| neonate | 1 / 31097 | 32 |  |
| infant | 6 / 23620 | 254 |  |
| juvenile | 10 / 55556 | 179 | |
| adult | 184 / 1939121 | 94 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 1 / 12794 | 78 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 7 / 94178 | 74 | |
| cervical tumor | 4 / 34366 | 116 | |
| chondrosarcoma | 11 / 82823 | 132 | |
| colorectal tumor | 21 / 114246 | 183 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 21 / 119369 | 175 | |
| germ cell tumor | 45 / 263845 | 170 | |
| glioma | 9 / 106883 | 84 | |
| head and neck tumor | 13 / 136302 | 95 | |
| kidney tumor | 9 / 68959 | 130 | |
| leukemia | 4 / 95842 | 41 | |
| liver tumor | 6 / 96359 | 62 | |
| lung tumor | 7 / 103127 | 67 | |
| lymphoma | 11 / 71755 | 153 | |
| non-neoplasia | 12 / 97250 | 123 | |
| normal | 316 / 3360307 | 94 | |
| ovarian tumor | 10 / 76682 | 130 | |
| pancreatic tumor | 15 / 104616 | 143 | |
| primitive neuroectodermal tumor of the CNS | 33 / 125680 | 262 | |
| prostate cancer | 15 / 102680 | 146 | |
| retinoblastoma | 1 / 46356 | 21 | |
| skin tumor | 54 / 124949 | 432 | |
| soft tissue/muscle tissue tumor | 24 / 125191 | 191 | |
| uterine tumor | 16 / 90257 | 177 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 5 / 33197 | 150 | |
| ascites | 9 / 40015 | 224 | |
| bladder | 4 / 29757 | 134 | |
| blood | 12 / 123478 | 97 | |
| bone | 7 / 71655 | 97 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 86 / 1100989 | 78 | |
| cervix | 5 / 48171 | 103 | |
| connective tissue | 35 / 149255 | 234 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 18 / 215722 | 83 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 14 / 211054 | 66 | |
| heart | 1 / 89626 | 11 | |
| intestine | 44 / 234472 | 187 | |
| kidney | 21 / 211777 | 99 | |
| larynx | 0 / 24145 | 0 | |
| liver | 15 / 207743 | 72 | |
| lung | 26 / 336974 | 77 | |
| lymph | 11 / 44270 | 248 | |
| lymph node | 9 / 91610 | 98 | |
| mammary gland | 10 / 153271 | 65 | |
| mouth | 12 / 67052 | 178 | |
| muscle | 13 / 107715 | 120 | |
| nerve | 2 / 15768 | 126 | |
| ovary | 19 / 102051 | 186 | |
| pancreas | 26 / 214812 | 121 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 2 / 41328 | 48 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 33 / 280825 | 117 | |
| prostate | 25 / 189345 | 132 | |
| salivary gland | 1 / 20155 | 49 | |
| skin | 65 / 210574 | 308 | |
| spleen | 10 / 53952 | 185 | |
| stomach | 13 / 96619 | 134 | |
| testis | 34 / 330442 | 102 | |
| thymus | 12 / 81131 | 147 | |
| thyroid | 2 / 47473 | 42 | |
| tonsil | 5 / 16999 | 294 | |
| trachea | 4 / 52413 | 76 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 35 / 232878 | 150 | |
| vascular | 6 / 51780 | 115 | |
- Probe name: A_23_P139998
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 4.8 ± 0.48 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 4.73 ± 0.51 | |
| Basal Part of Pons | 4.67 ± 0.44 | |
| Cerebellar Cortex | 4.92 ± 0.5 | |
| Cerebellar Nuclei | 4.28 ± 0.51 | |
| Claustrum | 4.33 ± 0.68 | |
| Epithalamus | 4.93 ± 0.42 | |
| Frontal Lobe | 4.92 ± 0.46 | |
| Globus Pallidus | 4.75 ± 0.35 | |
| Hypothalamus | 4.49 ± 0.41 | |
| Insula | 4.97 ± 0.4 | |
| Limbic Lobe | 4.95 ± 0.59 | |
| Mesencephalon | 4.77 ± 0.58 | |
| Myelencephalon | 4.82 ± 0.49 | |
| Occipital Lobe | 4.74 ± 0.41 | |
| Parietal Lobe | 4.81 ± 0.55 | |
| Pontine Tegmentum | 4.71 ± 0.55 | |
| Striatum | 4.65 ± 0.38 | |
| Subthalamus | 4.63 ± 0.33 | |
| Temporal Lobe | 4.91 ± 0.46 | |
| Thalamus | 4.75 ± 0.33 | |
| White Matter | 4.13 ± 0.97 | |
Mouse Brain ISH 