Annotation Detail for ANKRD13D
Basic Information Top
| Gene Symbol: | ANKRD13D ( MGC50828 ) |
|---|---|
| Gene Full Name: | ankyrin repeat domain 13 family, member D |
| Band: | 11q13.2 |
| Quick Links | Entrez ID:338692; OMIM: NA; Uniprot ID:AN13D_HUMAN; ENSEMBL ID: ENSG00000172932; HGNC ID: 27880 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.438673
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 3 / 70761 | 42 |  |
| blastocyst | 1 / 62319 | 16 | |
| fetus | 34 / 564012 | 60 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 93 / 1939121 | 47 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 2 / 17475 | 114 | |
| breast (mammary gland) tumor | 7 / 94178 | 74 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 4 / 82823 | 48 | |
| colorectal tumor | 5 / 114246 | 43 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 2 / 119369 | 16 | |
| germ cell tumor | 5 / 263845 | 18 | |
| glioma | 2 / 106883 | 18 | |
| head and neck tumor | 3 / 136302 | 22 | |
| kidney tumor | 2 / 68959 | 29 | |
| leukemia | 8 / 95842 | 83 | |
| liver tumor | 2 / 96359 | 20 | |
| lung tumor | 3 / 103127 | 29 | |
| lymphoma | 9 / 71755 | 125 | |
| non-neoplasia | 1 / 97250 | 10 |  |
| normal | 141 / 3360307 | 41 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 3 / 104616 | 28 | |
| primitive neuroectodermal tumor of the CNS | 4 / 125680 | 31 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 1 / 46356 | 21 | |
| skin tumor | 1 / 124949 | 8 | |
| soft tissue/muscle tissue tumor | 10 / 125191 | 79 | |
| uterine tumor | 4 / 90257 | 44 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 1 / 29757 | 33 | |
| blood | 6 / 123478 | 48 | |
| bone | 3 / 71655 | 41 | |
| bone marrow | 3 / 48801 | 61 | |
| brain | 49 / 1100989 | 44 | |
| cervix | 5 / 48171 | 103 | |
| connective tissue | 10 / 149255 | 66 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 11 / 215722 | 50 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 4 / 211054 | 18 | |
| heart | 2 / 89626 | 22 | |
| intestine | 11 / 234472 | 46 | |
| kidney | 2 / 211777 | 9 | |
| larynx | 1 / 24145 | 41 | |
| liver | 5 / 207743 | 24 | |
| lung | 8 / 336974 | 23 | |
| lymph | 2 / 44270 | 45 | |
| lymph node | 5 / 91610 | 54 | |
| mammary gland | 7 / 153271 | 45 | |
| mouth | 2 / 67052 | 29 | |
| muscle | 2 / 107715 | 18 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 1 / 102051 | 9 | |
| pancreas | 6 / 214812 | 27 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 2 / 16585 | 120 | |
| placenta | 10 / 280825 | 35 | |
| prostate | 3 / 189345 | 15 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 3 / 210574 | 14 | |
| spleen | 7 / 53952 | 129 | |
| stomach | 1 / 96619 | 10 | |
| testis | 2 / 330442 | 6 | |
| thymus | 12 / 81131 | 147 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 1 / 52413 | 19 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 9 / 232878 | 38 | |
| vascular | 1 / 51780 | 19 | |
Microarray in - Probe name: A_24_P76105
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 4.22 ± 0.63 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 4.01 ± 0.65 | |
| Basal Part of Pons | 4.86 ± 0.71 | |
| Cerebellar Cortex | 5.11 ± 0.48 | |
| Cerebellar Nuclei | 4.11 ± 0.35 | |
| Claustrum | 4.01 ± 0.57 | |
| Epithalamus | 4.55 ± 0.61 | |
| Frontal Lobe | 4.63 ± 0.61 | |
| Globus Pallidus | 3.73 ± 0.35 | |
| Hypothalamus | 4.43 ± 0.61 | |
| Insula | 4.76 ± 0.36 | |
| Limbic Lobe | 4.45 ± 0.7 | |
| Mesencephalon | 4.42 ± 0.72 | |
| Myelencephalon | 4.49 ± 0.62 | |
| Occipital Lobe | 4.32 ± 0.59 | |
| Parietal Lobe | 4.45 ± 0.66 | |
| Pontine Tegmentum | 4.38 ± 0.66 | |
| Striatum | 3.77 ± 0.5 | |
| Subthalamus | 4.2 ± 0.13 | |
| Temporal Lobe | 4.73 ± 0.54 | |
| Thalamus | 4.57 ± 0.59 | |
| White Matter | 4.5 ± 0.46 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Ankrd13d | CB | Cerebellum | 21.32 | |
| 30.04 | | |||
| Ankrd13d | CTX | Cerebral cortex | 65.77 | |
| 51.51 | | |||
| Ankrd13d | HIP | Hippocampal region | 37.74 | |
| 43.72 | | |||
| Ankrd13d | HPF | Hippocampal formation | 48.11 | |
| 47.7 | | |||
| Ankrd13d | HY | Hypothalamus | 57.41 | |
| 44.94 | | |||
| Ankrd13d | LSX | Lateral septal complex | 56.95 | |
| 42.89 | | |||
| Ankrd13d | MB | Midbrain | 42.51 | |
| 40.4 | | |||
| Ankrd13d | MY | Medulla | 38.94 | |
| 46.76 | | |||
| Ankrd13d | OLF | Olfactory bulb | 56.14 | |
| 45.04 | | |||
| Ankrd13d | P | Pons | 41.64 | |
| 48.85 | | |||
| Ankrd13d | PAL | Pallidum | 47.1 | |
| 44.94 | | |||
| Ankrd13d | RHP | Retrohippocampal region | 64.02 | |
| 52.66 | | |||
| Ankrd13d | sAMY | Striatum-like amygdalar nuclei | 61.61 | |
| 46.67 | | |||
| Ankrd13d | STR | Striatum | 20.54 | |
| 15.56 | | |||
| Ankrd13d | STRd | Striatum dorsal region | 10.72 | |
| 8.55 | | |||
| Ankrd13d | STRv | Striatum ventral region | 12.94 | |
| 8.9 | | |||
| Ankrd13d | TH | Thalamus | 55.3 | |
| 48.38 | |