AutismKB 2.0

Annotation Detail for JMJD8


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Basic Information Top
Gene Symbol:JMJD8 ( C16orf20 )
Gene Full Name: jumonji domain containing 8
Band: 16p13.3
Quick LinksEntrez ID:339123; OMIM: NA; Uniprot ID:JMJD8_HUMAN; ENSEMBL ID: ENSG00000161999; HGNC ID: 14148
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body5 / 7076170
blastocyst0 / 623190 
fetus32 / 56401256
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult186 / 193912195
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor1 / 1279478
bladder carcinoma0 / 174750 
breast (mammary gland) tumor6 / 9417863
cervical tumor2 / 3436658
chondrosarcoma6 / 8282372
colorectal tumor13 / 114246113
esophageal tumor0 / 172900 
gastrointestinal tumor15 / 119369125
germ cell tumor15 / 26384556
glioma12 / 106883112
head and neck tumor11 / 13630280
kidney tumor4 / 6895958
leukemia9 / 9584293
liver tumor0 / 963590 
lung tumor13 / 103127126
lymphoma0 / 717550 
non-neoplasia6 / 9725061
normal191 / 336030756
ovarian tumor14 / 76682182
pancreatic tumor12 / 104616114
primitive neuroectodermal tumor of the CNS25 / 125680198
prostate cancer14 / 102680136
retinoblastoma0 / 463560 
skin tumor8 / 12494964
soft tissue/muscle tissue tumor6 / 12519147
uterine tumor8 / 9025788
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland1 / 3319730
ascites9 / 40015224
bladder0 / 297570 
blood13 / 123478105
bone2 / 7165527
bone marrow1 / 4880120
brain48 / 110098943
cervix4 / 4817183
connective tissue5 / 14925533
ear0 / 162120 
embryonic tissue12 / 21572255
esophagus0 / 202090 
eye15 / 21105471
heart8 / 8962689
intestine16 / 23447268
kidney7 / 21177733
larynx3 / 24145124
liver1 / 2077434
lung33 / 33697497
lymph0 / 442700 
lymph node2 / 9161021
mammary gland13 / 15327184
mouth2 / 6705229
muscle8 / 10771574
nerve1 / 1576863
ovary25 / 102051244
pancreas17 / 21481279
parathyroid1 / 2053948
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta18 / 28082564
prostate21 / 189345110
salivary gland5 / 20155248
skin26 / 210574123
spleen0 / 539520 
stomach8 / 9661982
testis12 / 33044236
thymus0 / 811310 
thyroid2 / 4747342
tonsil1 / 1699958
trachea0 / 524130 
umbilical cord0 / 136800 
uterus19 / 23287881
vascular0 / 517800 
Microarray in BioGPS Top
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
2610003J06RikCBCerebellum0.41
1.21
2610003J06RikCTXCerebral cortex0.34
0.29
2610003J06RikHIPHippocampal region1.13
1.01
2610003J06RikHPFHippocampal formation0.97
0.8
2610003J06RikHYHypothalamus1.22
1.2
2610003J06RikLSXLateral septal complex0.65
0.47
2610003J06RikMBMidbrain0.64
0.94
2610003J06RikMYMedulla1.56
2.23
2610003J06RikOLFOlfactory bulb2.54
3.17
2610003J06RikPPons0.89
1.26
2610003J06RikPALPallidum1.04
1.18
2610003J06RikRHPRetrohippocampal region0.7
0.51
2610003J06RiksAMYStriatum-like amygdalar nuclei0.69
0.82
2610003J06RikSTRStriatum0.93
1.03
2610003J06RikSTRdStriatum dorsal region0.58
0.5
2610003J06RikSTRvStriatum ventral region2.1
2.72
2610003J06RikTHThalamus0.34
0.33
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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