Annotation Detail for MYPOP
Basic Information Top
| Gene Symbol: | MYPOP ( P42pop ) |
|---|---|
| Gene Full Name: | Myb-related transcription factor, partner of profilin |
| Band: | 19q13.32 |
| Quick Links | Entrez ID:339344; OMIM: NA; Uniprot ID:MYPOP_HUMAN; ENSEMBL ID: ENSG00000176182; HGNC ID: 20178 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.515478
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 1 / 70761 | 14 |  |
| blastocyst | 2 / 62319 | 32 | |
| fetus | 4 / 564012 | 7 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 19 / 1939121 | 9 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 1 / 114246 | 8 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 0 / 263845 | 0 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 1 / 103127 | 9 | |
| lymphoma | 3 / 71755 | 41 | |
| non-neoplasia | 3 / 97250 | 30 | |
| normal | 31 / 3360307 | 9 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 1 / 104616 | 9 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 2 / 124949 | 16 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 1 / 123478 | 8 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 12 / 1100989 | 10 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 3 / 215722 | 13 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 3 / 211054 | 14 | |
| heart | 0 / 89626 | 0 | |
| intestine | 1 / 234472 | 4 | |
| kidney | 2 / 211777 | 9 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 5 / 336974 | 14 | |
| lymph | 3 / 44270 | 67 |  |
| lymph node | 2 / 91610 | 21 | |
| mammary gland | 0 / 153271 | 0 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 1 / 214812 | 4 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 0 / 280825 | 0 | |
| prostate | 2 / 189345 | 10 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 2 / 210574 | 9 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 0 / 96619 | 0 | |
| testis | 1 / 330442 | 3 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 1 / 232878 | 4 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_24_P392486
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 11.76 ± 0.81 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 11.6 ± 0.78 | |
| Basal Part of Pons | 11.94 ± 0.45 | |
| Cerebellar Cortex | 11.09 ± 0.44 | |
| Cerebellar Nuclei | 12 ± 0.96 | |
| Claustrum | 11.96 ± 0.56 | |
| Epithalamus | 11.2 ± 0.75 | |
| Frontal Lobe | 11.62 ± 0.64 | |
| Globus Pallidus | 12.02 ± 0.52 | |
| Hypothalamus | 11.25 ± 0.34 | |
| Insula | 11.4 ± 0.74 | |
| Limbic Lobe | 11.62 ± 0.67 | |
| Mesencephalon | 11.59 ± 0.59 | |
| Myelencephalon | 11.61 ± 0.67 | |
| Occipital Lobe | 11.43 ± 0.7 | |
| Parietal Lobe | 11.5 ± 0.56 | |
| Pontine Tegmentum | 11.36 ± 0.56 | |
| Striatum | 11.82 ± 0.58 | |
| Subthalamus | 11.56 ± 0.28 | |
| Temporal Lobe | 11.45 ± 0.66 | |
| Thalamus | 11.67 ± 0.6 | |
| White Matter | 11.64 ± 0.32 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| P42pop | CB | Cerebellum | 38.63 | |
| 48.59 | | |||
| P42pop | CTX | Cerebral cortex | 31.26 | |
| 23.23 | | |||
| P42pop | HIP | Hippocampal region | 30.13 | |
| 43.07 | | |||
| P42pop | HPF | Hippocampal formation | 27.06 | |
| 31.7 | | |||
| P42pop | HY | Hypothalamus | 10.07 | |
| 8.59 | | |||
| P42pop | LSX | Lateral septal complex | 12.36 | |
| 8.45 | | |||
| P42pop | MB | Midbrain | 19.87 | |
| 18.37 | | |||
| P42pop | MY | Medulla | 31.78 | |
| 38.17 | | |||
| P42pop | OLF | Olfactory bulb | 36.71 | |
| 30.97 | | |||
| P42pop | P | Pons | 22.26 | |
| 25.31 | | |||
| P42pop | PAL | Pallidum | 11.49 | |
| 9.96 | | |||
| P42pop | RHP | Retrohippocampal region | 21.42 | |
| 16.46 | | |||
| P42pop | sAMY | Striatum-like amygdalar nuclei | 5.82 | |
| 3.82 | | |||
| P42pop | STR | Striatum | 11.85 | |
| 8.14 | | |||
| P42pop | STRd | Striatum dorsal region | 10.52 | |
| 7.3 | | |||
| P42pop | STRv | Striatum ventral region | 20 | |
| 13.07 | | |||
| P42pop | TH | Thalamus | 22.39 | |
| 20.28 | |