Annotation Detail for TSPAN33
Basic Information Top
| Gene Symbol: | TSPAN33 ( MGC50844,PEN ) |
|---|---|
| Gene Full Name: | tetraspanin 33 |
| Band: | 7q32.1 |
| Quick Links | Entrez ID:340348; OMIM: 610120; Uniprot ID:TSN33_HUMAN; ENSEMBL ID: ENSG00000158457; HGNC ID: 28743 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.27267
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 2 / 70761 | 28 |  |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 13 / 564012 | 23 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 52 / 1939121 | 26 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 4 / 94178 | 42 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 2 / 119369 | 16 | |
| germ cell tumor | 1 / 263845 | 3 |  |
| glioma | 4 / 106883 | 37 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 2 / 68959 | 29 | |
| leukemia | 5 / 95842 | 52 |  |
| liver tumor | 4 / 96359 | 41 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 3 / 71755 | 41 | |
| non-neoplasia | 2 / 97250 | 20 | |
| normal | 75 / 3360307 | 22 | |
| ovarian tumor | 3 / 76682 | 39 | |
| pancreatic tumor | 2 / 104616 | 19 | |
| primitive neuroectodermal tumor of the CNS | 1 / 125680 | 7 | |
| prostate cancer | 2 / 102680 | 19 | |
| retinoblastoma | 1 / 46356 | 21 | |
| skin tumor | 2 / 124949 | 16 | |
| soft tissue/muscle tissue tumor | 1 / 125191 | 7 | |
| uterine tumor | 7 / 90257 | 77 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 1 / 13106 | 76 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 1 / 29757 | 33 | |
| blood | 6 / 123478 | 48 | |
| bone | 1 / 71655 | 13 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 8 / 1100989 | 7 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 1 / 149255 | 6 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 2 / 215722 | 9 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 9 / 211054 | 42 | |
| heart | 3 / 89626 | 33 | |
| intestine | 1 / 234472 | 4 | |
| kidney | 11 / 211777 | 51 | |
| larynx | 0 / 24145 | 0 | |
| liver | 4 / 207743 | 19 | |
| lung | 3 / 336974 | 8 | |
| lymph | 2 / 44270 | 45 | |
| lymph node | 11 / 91610 | 120 | |
| mammary gland | 5 / 153271 | 32 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 5 / 102051 | 48 | |
| pancreas | 2 / 214812 | 9 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 1 / 280825 | 3 | |
| prostate | 8 / 189345 | 42 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 2 / 210574 | 9 | |
| spleen | 2 / 53952 | 37 | |
| stomach | 4 / 96619 | 41 | |
| testis | 9 / 330442 | 27 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 9 / 232878 | 38 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_32_P123652
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 4.5 ± 0.8 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 5.54 ± 0.62 | |
| Basal Part of Pons | 4.59 ± 0.63 | |
| Cerebellar Cortex | 5.39 ± 0.26 | |
| Cerebellar Nuclei | 4.62 ± 0.54 | |
| Claustrum | 4.75 ± 0.81 | |
| Epithalamus | 5.68 ± 0.43 | |
| Frontal Lobe | 5.07 ± 0.54 | |
| Globus Pallidus | 5.29 ± 0.23 | |
| Hypothalamus | 5.55 ± 0.3 | |
| Insula | 5 ± 0.46 | |
| Limbic Lobe | 4.82 ± 0.78 | |
| Mesencephalon | 5.24 ± 0.75 | |
| Myelencephalon | 4.92 ± 0.63 | |
| Occipital Lobe | 4.35 ± 0.8 | |
| Parietal Lobe | 4.86 ± 0.65 | |
| Pontine Tegmentum | 5.02 ± 0.72 | |
| Striatum | 3.76 ± 0.83 | |
| Subthalamus | 4.86 ± 0.21 | |
| Temporal Lobe | 4.85 ± 0.56 | |
| Thalamus | 5.05 ± 0.56 | |
| White Matter | 4.88 ± 0.82 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Tspan33 | CB | Cerebellum | 17.86 | |
| 27.52 | | |||
| Tspan33 | CTX | Cerebral cortex | 21.12 | |
| 16.94 | | |||
| Tspan33 | HIP | Hippocampal region | 41.73 | |
| 73.05 | | |||
| Tspan33 | HPF | Hippocampal formation | 35 | |
| 52.44 | | |||
| Tspan33 | HY | Hypothalamus | 17.72 | |
| 15.86 | | |||
| Tspan33 | LSX | Lateral septal complex | 50.25 | |
| 42.29 | | |||
| Tspan33 | MB | Midbrain | 8.98 | |
| 8.91 | | |||
| Tspan33 | MY | Medulla | 11.88 | |
| 15.96 | | |||
| Tspan33 | OLF | Olfactory bulb | 35.86 | |
| 31.87 | | |||
| Tspan33 | P | Pons | 5.14 | |
| 6.79 | | |||
| Tspan33 | PAL | Pallidum | 8.79 | |
| 8.1 | | |||
| Tspan33 | RHP | Retrohippocampal region | 24.51 | |
| 26.05 | | |||
| Tspan33 | sAMY | Striatum-like amygdalar nuclei | 20.18 | |
| 16.96 | | |||
| Tspan33 | STR | Striatum | 9.67 | |
| 8.61 | | |||
| Tspan33 | STRd | Striatum dorsal region | 4.34 | |
| 4.89 | | |||
| Tspan33 | STRv | Striatum ventral region | 3.81 | |
| 2.49 | | |||
| Tspan33 | TH | Thalamus | 62.28 | |
| 77.25 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00043167 | 27 | 126 | 152 | VSEIINNAIVHYRDDLDLQNLIDFGQK | Peptide Atlas |