Annotation Detail for NCKAP5
Basic Information Top
| Gene Symbol: | NCKAP5 ( ERIH1,ERIH2,FLJ34870,NAP5 ) |
|---|---|
| Gene Full Name: | NCK-associated protein 5 |
| Band: | 2q21.2 |
| Quick Links | Entrez ID:344148; OMIM: 608789; Uniprot ID:NCKP5_HUMAN; ENSEMBL ID: ENSG00000176771; HGNC ID: 29847 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.537329
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 3 / 70761 | 42 |  |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 19 / 564012 | 33 | |
| neonate | 2 / 31097 | 64 |  |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 21 / 1939121 | 10 |  |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 6 / 263845 | 22 | |
| glioma | 2 / 106883 | 18 | |
| head and neck tumor | 2 / 136302 | 14 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 2 / 103127 | 19 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 1 / 97250 | 10 | |
| normal | 60 / 3360307 | 17 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 1 / 102680 | 9 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 1 / 125191 | 7 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 10 / 1100989 | 9 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 2 / 149255 | 13 | |
| ear | 4 / 16212 | 246 |  |
| embryonic tissue | 4 / 215722 | 18 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 4 / 211054 | 18 | |
| heart | 1 / 89626 | 11 | |
| intestine | 0 / 234472 | 0 | |
| kidney | 5 / 211777 | 23 | |
| larynx | 1 / 24145 | 41 | |
| liver | 2 / 207743 | 9 | |
| lung | 5 / 336974 | 14 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 2 / 153271 | 13 | |
| mouth | 1 / 67052 | 14 | |
| muscle | 2 / 107715 | 18 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 0 / 214812 | 0 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 0 / 280825 | 0 | |
| prostate | 1 / 189345 | 5 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 0 / 210574 | 0 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 3 / 330442 | 9 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 2 / 13680 | 146 | |
| uterus | 0 / 232878 | 0 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_23_P360079
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 6.75 ± 0.36 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 7.25 ± 0.38 | |
| Basal Part of Pons | 6.59 ± 0.32 | |
| Cerebellar Cortex | 6.62 ± 0.19 | |
| Cerebellar Nuclei | 7.42 ± 0.41 | |
| Claustrum | 6.63 ± 0.35 | |
| Epithalamus | 7.27 ± 0.41 | |
| Frontal Lobe | 6.77 ± 0.43 | |
| Globus Pallidus | 7.95 ± 0.21 | |
| Hypothalamus | 6.77 ± 0.22 | |
| Insula | 6.65 ± 0.25 | |
| Limbic Lobe | 6.71 ± 0.56 | |
| Mesencephalon | 6.99 ± 0.55 | |
| Myelencephalon | 6.96 ± 0.49 | |
| Occipital Lobe | 6.97 ± 0.4 | |
| Parietal Lobe | 6.81 ± 0.42 | |
| Pontine Tegmentum | 7.09 ± 0.35 | |
| Striatum | 7.77 ± 0.51 | |
| Subthalamus | 6.86 ± 0.18 | |
| Temporal Lobe | 6.76 ± 0.33 | |
| Thalamus | 7.12 ± 0.27 | |
| White Matter | 8.52 ± 0.28 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| E030049G20Rik | CB | Cerebellum | 32.47 | |
| 54.91 | | |||
| E030049G20Rik | CTX | Cerebral cortex | 26.15 | |
| 19.48 | | |||
| E030049G20Rik | HIP | Hippocampal region | 26.51 | |
| 31.56 | | |||
| E030049G20Rik | HPF | Hippocampal formation | 33.38 | |
| 33.08 | | |||
| E030049G20Rik | HY | Hypothalamus | 10.53 | |
| 9.55 | | |||
| E030049G20Rik | LSX | Lateral septal complex | 1.64 | |
| 1.13 | | |||
| E030049G20Rik | MB | Midbrain | 4.42 | |
| 3.84 | | |||
| E030049G20Rik | MY | Medulla | 11.64 | |
| 11.51 | | |||
| E030049G20Rik | OLF | Olfactory bulb | 40.91 | |
| 39.31 | | |||
| E030049G20Rik | P | Pons | 6.76 | |
| 5.56 | | |||
| E030049G20Rik | PAL | Pallidum | 15.38 | |
| 13.41 | | |||
| E030049G20Rik | RHP | Retrohippocampal region | 47.28 | |
| 37.1 | | |||
| E030049G20Rik | sAMY | Striatum-like amygdalar nuclei | 30.88 | |
| 20.54 | | |||
| E030049G20Rik | STR | Striatum | 22.51 | |
| 16.22 | | |||
| E030049G20Rik | STRd | Striatum dorsal region | 26.93 | |
| 19.82 | | |||
| E030049G20Rik | STRv | Striatum ventral region | 15.85 | |
| 11.29 | | |||
| E030049G20Rik | TH | Thalamus | 13.82 | |
| 10.95 | |