AutismKB 2.0

Annotation Detail for RTP2


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Basic Information Top
Gene Symbol:RTP2 ( MGC78665 )
Gene Full Name: receptor (chemosensory) transporter protein 2
Band: 3q27.3
Quick LinksEntrez ID:344892; OMIM: 609138; Uniprot ID:RTP2_HUMAN; ENSEMBL ID: ENSG00000198471; HGNC ID: 32486
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Microarray in BioGPS Top
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_146_PI416573500
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala2.62 ± 1.03
Basal Forebrain2.7 ± 0.77
Basal Part of Pons2.46 ± 0.67
Cerebellar Cortex2.45 ± 0.83
Cerebellar Nuclei2.58 ± 0.6
Claustrum3.23 ± 1.17
Epithalamus2.18 ± 0.8
Frontal Lobe2.37 ± 0.82
Globus Pallidus2.9 ± 0.96
Hypothalamus2.23 ± 0.83
Insula2.65 ± 0.96
Limbic Lobe2.63 ± 0.85
Mesencephalon2.64 ± 0.86
Myelencephalon2.64 ± 0.8
Occipital Lobe2.61 ± 1.03
Parietal Lobe2.6 ± 0.83
Pontine Tegmentum2.48 ± 0.8
Striatum2.68 ± 0.93
Subthalamus2.41 ± 0.88
Temporal Lobe2.53 ± 0.88
Thalamus2.56 ± 0.74
White Matter2.82 ± 0.67
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Rtp2CBCerebellum1.19
2
Rtp2CTXCerebral cortex0.95
1.15
Rtp2HIPHippocampal region1.18
1.44
Rtp2HPFHippocampal formation0.87
0.95
Rtp2HYHypothalamus0.22
0.25
Rtp2LSXLateral septal complex0.09
0.08
Rtp2MBMidbrain0.42
0.48
Rtp2MYMedulla0.44
0.53
Rtp2OLFOlfactory bulb1.04
0.92
Rtp2PPons0.35
0.37
Rtp2PALPallidum0.31
0.3
Rtp2RHPRetrohippocampal region0.33
0.26
Rtp2sAMYStriatum-like amygdalar nuclei0.5
0.44
Rtp2STRStriatum0.57
0.75
Rtp2STRdStriatum dorsal region0.69
0.95
Rtp2STRvStriatum ventral region0.51
0.66
Rtp2THThalamus0.52
0.66
Peptide Top

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Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018