Annotation Detail for MACC1
Basic Information Top
| Gene Symbol: | MACC1 ( 7A5,SH3BP4L ) |
|---|---|
| Gene Full Name: | metastasis associated in colon cancer 1 |
| Band: | 7p21.1 |
| Quick Links | Entrez ID:346389; OMIM: 612646; Uniprot ID:MACC1_HUMAN; ENSEMBL ID: ENSG00000183742; HGNC ID: 30215 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.598388
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 1 / 70761 | 14 |  |
| blastocyst | 1 / 62319 | 16 | |
| fetus | 6 / 564012 | 10 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 59 / 1939121 | 30 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 3 / 94178 | 31 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 31 / 114246 | 271 |  |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 6 / 119369 | 50 | |
| germ cell tumor | 0 / 263845 | 0 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 2 / 136302 | 14 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 1 / 95842 | 10 | |
| liver tumor | 2 / 96359 | 20 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 1 / 97250 | 10 | |
| normal | 39 / 3360307 | 11 | |
| ovarian tumor | 3 / 76682 | 39 | |
| pancreatic tumor | 4 / 104616 | 38 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 2 / 48801 | 40 | |
| brain | 1 / 1100989 | 0 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 1 / 149255 | 6 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 2 / 215722 | 9 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 1 / 211054 | 4 | |
| heart | 2 / 89626 | 22 | |
| intestine | 35 / 234472 | 149 |  |
| kidney | 10 / 211777 | 47 | |
| larynx | 0 / 24145 | 0 | |
| liver | 3 / 207743 | 14 | |
| lung | 8 / 336974 | 23 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 1 / 91610 | 10 | |
| mammary gland | 6 / 153271 | 39 | |
| mouth | 2 / 67052 | 29 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 3 / 102051 | 29 | |
| pancreas | 9 / 214812 | 41 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 0 / 280825 | 0 | |
| prostate | 1 / 189345 | 5 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 0 / 210574 | 0 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 6 / 96619 | 62 | |
| testis | 0 / 330442 | 0 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 3 / 52413 | 57 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 0 / 232878 | 0 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_32_P144599
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 3.51 ± 1.28 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 2.66 ± 0.6 | |
| Basal Part of Pons | 2.98 ± 0.95 | |
| Cerebellar Cortex | 2.67 ± 0.84 | |
| Cerebellar Nuclei | 3.22 ± 0.91 | |
| Claustrum | 3.95 ± 0.73 | |
| Epithalamus | 2.26 ± 0.94 | |
| Frontal Lobe | 2.87 ± 0.83 | |
| Globus Pallidus | 3.34 ± 0.7 | |
| Hypothalamus | 3.12 ± 0.94 | |
| Insula | 3.19 ± 0.61 | |
| Limbic Lobe | 2.87 ± 0.81 | |
| Mesencephalon | 3.16 ± 0.89 | |
| Myelencephalon | 2.99 ± 0.94 | |
| Occipital Lobe | 2.9 ± 0.82 | |
| Parietal Lobe | 3.02 ± 1.04 | |
| Pontine Tegmentum | 2.85 ± 0.88 | |
| Striatum | 2.99 ± 0.89 | |
| Subthalamus | 3.45 ± 1.08 | |
| Temporal Lobe | 2.86 ± 0.9 | |
| Thalamus | 2.96 ± 0.8 | |
| White Matter | 3.17 ± 0.68 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| 4732474O15Rik | CB | Cerebellum | 47.3 | |
| 66.37 | | |||
| 4732474O15Rik | CTX | Cerebral cortex | 100 | |
| 100 | | |||
| 4732474O15Rik | HIP | Hippocampal region | 88.92 | |
| 100 | | |||
| 4732474O15Rik | HPF | Hippocampal formation | 100 | |
| 100 | | |||
| 4732474O15Rik | HY | Hypothalamus | 100 | |
| 89.63 | | |||
| 4732474O15Rik | LSX | Lateral septal complex | 100 | |
| 90.23 | | |||
| 4732474O15Rik | MB | Midbrain | 89.83 | |
| 88.02 | | |||
| 4732474O15Rik | MY | Medulla | 76.9 | |
| 87.76 | | |||
| 4732474O15Rik | OLF | Olfactory bulb | 100 | |
| 100 | | |||
| 4732474O15Rik | P | Pons | 79.9 | |
| 87.99 | | |||
| 4732474O15Rik | PAL | Pallidum | 100 | |
| 98.48 | | |||
| 4732474O15Rik | RHP | Retrohippocampal region | 100 | |
| 100 | | |||
| 4732474O15Rik | sAMY | Striatum-like amygdalar nuclei | 100 | |
| 100 | | |||
| 4732474O15Rik | STR | Striatum | 100 | |
| 100 | | |||
| 4732474O15Rik | STRd | Striatum dorsal region | 100 | |
| 100 | | |||
| 4732474O15Rik | STRv | Striatum ventral region | 100 | |
| 100 | | |||
| 4732474O15Rik | TH | Thalamus | 100 | |
| 100 | |