Annotation Detail for SLC35B2
Basic Information Top
| Gene Symbol: | SLC35B2 ( PAPST1,SLL,UGTrel4 ) |
|---|---|
| Gene Full Name: | solute carrier family 35, member B2 |
| Band: | 6p21.1 |
| Quick Links | Entrez ID:347734; OMIM: 610788; Uniprot ID:S35B2_HUMAN; ENSEMBL ID: ENSG00000157593; HGNC ID: 16872 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.182885
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 1 / 70761 | 14 |  |
| blastocyst | 3 / 62319 | 48 | |
| fetus | 15 / 564012 | 26 | |
| neonate | 1 / 31097 | 32 | |
| infant | 1 / 23620 | 42 | |
| juvenile | 10 / 55556 | 179 |  |
| adult | 139 / 1939121 | 71 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 2 / 12794 | 156 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 12 / 94178 | 127 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 6 / 82823 | 72 | |
| colorectal tumor | 8 / 114246 | 70 | |
| esophageal tumor | 5 / 17290 | 289 |  |
| gastrointestinal tumor | 14 / 119369 | 117 | |
| germ cell tumor | 13 / 263845 | 49 | |
| glioma | 21 / 106883 | 196 | |
| head and neck tumor | 2 / 136302 | 14 | |
| kidney tumor | 11 / 68959 | 159 | |
| leukemia | 11 / 95842 | 114 | |
| liver tumor | 7 / 96359 | 72 | |
| lung tumor | 5 / 103127 | 48 | |
| lymphoma | 10 / 71755 | 139 | |
| non-neoplasia | 13 / 97250 | 133 | |
| normal | 223 / 3360307 | 66 | |
| ovarian tumor | 13 / 76682 | 169 | |
| pancreatic tumor | 10 / 104616 | 95 | |
| primitive neuroectodermal tumor of the CNS | 18 / 125680 | 143 | |
| prostate cancer | 12 / 102680 | 116 | |
| retinoblastoma | 4 / 46356 | 86 | |
| skin tumor | 44 / 124949 | 352 | |
| soft tissue/muscle tissue tumor | 3 / 125191 | 23 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 1 / 13106 | 76 | |
| adrenal gland | 2 / 33197 | 60 | |
| ascites | 5 / 40015 | 124 | |
| bladder | 6 / 29757 | 201 | |
| blood | 16 / 123478 | 129 | |
| bone | 8 / 71655 | 111 | |
| bone marrow | 2 / 48801 | 40 | |
| brain | 98 / 1100989 | 89 | |
| cervix | 3 / 48171 | 62 | |
| connective tissue | 13 / 149255 | 87 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 10 / 215722 | 46 | |
| esophagus | 5 / 20209 | 247 | |
| eye | 15 / 211054 | 71 | |
| heart | 4 / 89626 | 44 | |
| intestine | 21 / 234472 | 89 | |
| kidney | 15 / 211777 | 70 | |
| larynx | 0 / 24145 | 0 | |
| liver | 8 / 207743 | 38 | |
| lung | 22 / 336974 | 65 | |
| lymph | 2 / 44270 | 45 | |
| lymph node | 3 / 91610 | 32 | |
| mammary gland | 16 / 153271 | 104 | |
| mouth | 1 / 67052 | 14 | |
| muscle | 4 / 107715 | 37 | |
| nerve | 3 / 15768 | 190 | |
| ovary | 14 / 102051 | 137 | |
| pancreas | 25 / 214812 | 116 | |
| parathyroid | 2 / 20539 | 97 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 17 / 280825 | 60 | |
| prostate | 19 / 189345 | 100 | |
| salivary gland | 2 / 20155 | 99 | |
| skin | 53 / 210574 | 251 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 7 / 96619 | 72 | |
| testis | 19 / 330442 | 57 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 1 / 16999 | 58 | |
| trachea | 1 / 52413 | 19 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 8 / 232878 | 34 | |
| vascular | 8 / 51780 | 154 | |
Microarray in - Probe name: CUST_5996_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 2.51 ± 1.02 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 2.35 ± 0.16 | |
| Basal Part of Pons | 2.24 ± 0.47 | |
| Cerebellar Cortex | 2.69 ± 0.59 | |
| Cerebellar Nuclei | 2.95 ± 0.84 | |
| Claustrum | 2.62 ± 0.7 | |
| Epithalamus | 2.74 ± 0.56 | |
| Frontal Lobe | 2.46 ± 0.65 | |
| Globus Pallidus | 2.91 ± 0.8 | |
| Hypothalamus | 1.92 ± 0.69 | |
| Insula | 2.23 ± 0.78 | |
| Limbic Lobe | 2.42 ± 0.5 | |
| Mesencephalon | 2.64 ± 0.69 | |
| Myelencephalon | 2.63 ± 0.62 | |
| Occipital Lobe | 2.82 ± 0.66 | |
| Parietal Lobe | 2.49 ± 0.64 | |
| Pontine Tegmentum | 2.4 ± 0.61 | |
| Striatum | 2.4 ± 0.76 | |
| Subthalamus | 2.24 ± 0.92 | |
| Temporal Lobe | 2.41 ± 0.64 | |
| Thalamus | 2.71 ± 0.53 | |
| White Matter | 3.74 ± 0.41 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Slc35b2 | CB | Cerebellum | 36.61 | |
| 27.43 | | |||
| Slc35b2 | CTX | Cerebral cortex | 41.17 | |
| 26.53 | | |||
| Slc35b2 | HIP | Hippocampal region | 51.93 | |
| 33.06 | | |||
| Slc35b2 | HPF | Hippocampal formation | 59.13 | |
| 38.96 | | |||
| Slc35b2 | HY | Hypothalamus | 70.62 | |
| 41.25 | | |||
| Slc35b2 | LSX | Lateral septal complex | 35.03 | |
| 18.07 | | |||
| Slc35b2 | MB | Midbrain | 37.7 | |
| 26.79 | | |||
| Slc35b2 | MY | Medulla | 87.63 | |
| 75.7 | | |||
| Slc35b2 | OLF | Olfactory bulb | 60.2 | |
| 35.3 | | |||
| Slc35b2 | P | Pons | 77.52 | |
| 63.88 | | |||
| Slc35b2 | PAL | Pallidum | 40.7 | |
| 30.11 | | |||
| Slc35b2 | RHP | Retrohippocampal region | 72.04 | |
| 47.01 | | |||
| Slc35b2 | sAMY | Striatum-like amygdalar nuclei | 45.38 | |
| 26.67 | | |||
| Slc35b2 | STR | Striatum | 20.91 | |
| 12.11 | | |||
| Slc35b2 | STRd | Striatum dorsal region | 7.45 | |
| 4.89 | | |||
| Slc35b2 | STRv | Striatum ventral region | 49.9 | |
| 25.66 | | |||
| Slc35b2 | TH | Thalamus | 21.81 | |
| 13.46 | |