Annotation Detail for FAM195B
Basic Information Top
| Gene Symbol: | FAM195B ( DKFZp686A17165,MGC133184 ) |
|---|---|
| Gene Full Name: | family with sequence similarity 195, member B |
| Band: | 17q25.3 |
| Quick Links | Entrez ID:348262; OMIM: NA; Uniprot ID:F195B_HUMAN; ENSEMBL ID: ENSG00000215621,ENSG00000225663; HGNC ID: |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.514632
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 12 / 70761 | 169 |  |
| blastocyst | 6 / 62319 | 96 | |
| fetus | 14 / 564012 | 24 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 1 / 23620 | 42 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 69 / 1939121 | 35 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 3 / 94178 | 31 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 4 / 82823 | 48 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 4 / 119369 | 33 | |
| germ cell tumor | 13 / 263845 | 49 | |
| glioma | 14 / 106883 | 130 | |
| head and neck tumor | 9 / 136302 | 66 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 2 / 95842 | 20 | |
| liver tumor | 4 / 96359 | 41 | |
| lung tumor | 11 / 103127 | 106 | |
| lymphoma | 6 / 71755 | 83 | |
| non-neoplasia | 3 / 97250 | 30 | |
| normal | 117 / 3360307 | 34 | |
| ovarian tumor | 3 / 76682 | 39 | |
| pancreatic tumor | 13 / 104616 | 124 | |
| primitive neuroectodermal tumor of the CNS | 4 / 125680 | 31 | |
| prostate cancer | 4 / 102680 | 38 | |
| retinoblastoma | 5 / 46356 | 107 | |
| skin tumor | 20 / 124949 | 160 | |
| soft tissue/muscle tissue tumor | 6 / 125191 | 47 | |
| uterine tumor | 5 / 90257 | 55 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 3 / 13106 | 228 |  |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 0 / 29757 | 0 | |
| blood | 2 / 123478 | 16 | |
| bone | 6 / 71655 | 83 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 35 / 1100989 | 31 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 3 / 149255 | 20 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 24 / 215722 | 111 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 15 / 211054 | 71 | |
| heart | 0 / 89626 | 0 | |
| intestine | 7 / 234472 | 29 | |
| kidney | 2 / 211777 | 9 |  |
| larynx | 0 / 24145 | 0 | |
| liver | 4 / 207743 | 19 | |
| lung | 19 / 336974 | 56 | |
| lymph | 4 / 44270 | 90 | |
| lymph node | 2 / 91610 | 21 | |
| mammary gland | 4 / 153271 | 26 | |
| mouth | 2 / 67052 | 29 | |
| muscle | 3 / 107715 | 27 | |
| nerve | 2 / 15768 | 126 | |
| ovary | 8 / 102051 | 78 | |
| pancreas | 18 / 214812 | 83 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 13 / 280825 | 46 | |
| prostate | 5 / 189345 | 26 | |
| salivary gland | 6 / 20155 | 297 | |
| skin | 21 / 210574 | 99 | |
| spleen | 2 / 53952 | 37 | |
| stomach | 0 / 96619 | 0 | |
| testis | 2 / 330442 | 6 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 13 / 232878 | 55 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_24_P237878
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 12.45 ± 0.29 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 12.35 ± 0.25 | |
| Basal Part of Pons | 12.61 ± 0.21 | |
| Cerebellar Cortex | 12.39 ± 0.16 | |
| Cerebellar Nuclei | 12.46 ± 0.23 | |
| Claustrum | 12.76 ± 0.22 | |
| Epithalamus | 12.1 ± 0.25 | |
| Frontal Lobe | 12.53 ± 0.25 | |
| Globus Pallidus | 12.37 ± 0.25 | |
| Hypothalamus | 12.34 ± 0.2 | |
| Insula | 12.5 ± 0.14 | |
| Limbic Lobe | 12.45 ± 0.26 | |
| Mesencephalon | 12.41 ± 0.21 | |
| Myelencephalon | 12.45 ± 0.28 | |
| Occipital Lobe | 12.17 ± 0.18 | |
| Parietal Lobe | 12.44 ± 0.24 | |
| Pontine Tegmentum | 12.32 ± 0.23 | |
| Striatum | 11.94 ± 0.27 | |
| Subthalamus | 12.54 ± 0.16 | |
| Temporal Lobe | 12.55 ± 0.24 | |
| Thalamus | 12.37 ± 0.2 | |
| White Matter | 12.49 ± 0.19 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| BC003940 | CB | Cerebellum | 18.22 | |
| 24.87 | | |||
| BC003940 | CTX | Cerebral cortex | 57.24 | |
| 46.67 | | |||
| BC003940 | HIP | Hippocampal region | 30.94 | |
| 35.67 | | |||
| BC003940 | HPF | Hippocampal formation | 31.48 | |
| 31.9 | | |||
| BC003940 | HY | Hypothalamus | 24.08 | |
| 20.8 | | |||
| BC003940 | LSX | Lateral septal complex | 6.59 | |
| 4.92 | | |||
| BC003940 | MB | Midbrain | 27.94 | |
| 27.66 | | |||
| BC003940 | MY | Medulla | 17.06 | |
| 19.52 | | |||
| BC003940 | OLF | Olfactory bulb | 33.94 | |
| 28.02 | | |||
| BC003940 | P | Pons | 29.86 | |
| 34.15 | | |||
| BC003940 | PAL | Pallidum | 23.94 | |
| 24.98 | | |||
| BC003940 | RHP | Retrohippocampal region | 33.15 | |
| 27.46 | | |||
| BC003940 | sAMY | Striatum-like amygdalar nuclei | 18.08 | |
| 14.92 | | |||
| BC003940 | STR | Striatum | 9.65 | |
| 8.3 | | |||
| BC003940 | STRd | Striatum dorsal region | 9 | |
| 8.01 | | |||
| BC003940 | STRv | Striatum ventral region | 8.55 | |
| 7.03 | | |||
| BC003940 | TH | Thalamus | 34.52 | |
| 31.43 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00428091 | 18 | 21 | 38 | SPPSSSEIFTPAHEENVR | Peptide Atlas |