Annotation Detail for TICAM2
Basic Information Top
| Gene Symbol: | TICAM2 ( MGC129876,MGC129877,TICAM-2,TIRAP3,TIRP,TRAM ) |
|---|---|
| Gene Full Name: | toll-like receptor adaptor molecule 2 |
| Band: | 5q22.3 |
| Quick Links | Entrez ID:353376; OMIM: 608321; Uniprot ID:TCAM2_HUMAN; ENSEMBL ID: ENSG00000243414; HGNC ID: 21354 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.709120
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 7 / 70761 | 98 |  |
| blastocyst | 3 / 62319 | 48 |  |
| fetus | 54 / 564012 | 95 | |
| neonate | 9 / 31097 | 289 |  |
| infant | 1 / 23620 | 42 | |
| juvenile | 4 / 55556 | 71 | |
| adult | 146 / 1939121 | 75 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 4 / 94178 | 42 | |
| cervical tumor | 1 / 34366 | 29 | |
| chondrosarcoma | 6 / 82823 | 72 | |
| colorectal tumor | 2 / 114246 | 17 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 6 / 119369 | 50 | |
| germ cell tumor | 26 / 263845 | 98 | |
| glioma | 6 / 106883 | 56 | |
| head and neck tumor | 20 / 136302 | 146 | |
| kidney tumor | 5 / 68959 | 72 | |
| leukemia | 1 / 95842 | 10 |  |
| liver tumor | 4 / 96359 | 41 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 1 / 71755 | 13 | |
| non-neoplasia | 12 / 97250 | 123 | |
| normal | 421 / 3360307 | 125 | |
| ovarian tumor | 3 / 76682 | 39 | |
| pancreatic tumor | 6 / 104616 | 57 | |
| primitive neuroectodermal tumor of the CNS | 4 / 125680 | 31 | |
| prostate cancer | 2 / 102680 | 19 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 8 / 124949 | 64 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 6 / 90257 | 66 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 2 / 40015 | 49 | |
| bladder | 3 / 29757 | 100 | |
| blood | 8 / 123478 | 64 | |
| bone | 4 / 71655 | 55 | |
| bone marrow | 6 / 48801 | 122 | |
| brain | 242 / 1100989 | 219 | |
| cervix | 1 / 48171 | 20 | |
| connective tissue | 17 / 149255 | 113 | |
| ear | 2 / 16212 | 123 | |
| embryonic tissue | 14 / 215722 | 64 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 10 / 211054 | 47 | |
| heart | 4 / 89626 | 44 | |
| intestine | 13 / 234472 | 55 | |
| kidney | 20 / 211777 | 94 | |
| larynx | 0 / 24145 | 0 | |
| liver | 12 / 207743 | 57 | |
| lung | 16 / 336974 | 47 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 10 / 91610 | 109 | |
| mammary gland | 9 / 153271 | 58 | |
| mouth | 23 / 67052 | 343 | |
| muscle | 3 / 107715 | 27 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 1 / 102051 | 9 | |
| pancreas | 24 / 214812 | 111 | |
| parathyroid | 3 / 20539 | 146 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 3 / 16585 | 180 | |
| placenta | 45 / 280825 | 160 | |
| prostate | 6 / 189345 | 31 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 18 / 210574 | 85 | |
| spleen | 5 / 53952 | 92 | |
| stomach | 2 / 96619 | 20 | |
| testis | 66 / 330442 | 199 | |
| thymus | 21 / 81131 | 258 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 120 / 52413 | 2289 |  |
| umbilical cord | 1 / 13680 | 73 | |
| uterus | 43 / 232878 | 184 | |
| vascular | 5 / 51780 | 96 | |
Microarray in - Probe name: CUST_8781_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 6.79 ± 0.25 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 6.87 ± 0.15 | |
| Basal Part of Pons | 6.75 ± 0.24 | |
| Cerebellar Cortex | 7.02 ± 0.2 | |
| Cerebellar Nuclei | 6.88 ± 0.18 | |
| Claustrum | 6.57 ± 0.32 | |
| Epithalamus | 7.07 ± 0.34 | |
| Frontal Lobe | 6.81 ± 0.24 | |
| Globus Pallidus | 7.1 ± 0.35 | |
| Hypothalamus | 6.83 ± 0.26 | |
| Insula | 6.78 ± 0.21 | |
| Limbic Lobe | 6.86 ± 0.22 | |
| Mesencephalon | 6.85 ± 0.29 | |
| Myelencephalon | 6.87 ± 0.3 | |
| Occipital Lobe | 7.1 ± 0.29 | |
| Parietal Lobe | 6.83 ± 0.24 | |
| Pontine Tegmentum | 6.93 ± 0.3 | |
| Striatum | 7.07 ± 0.32 | |
| Subthalamus | 6.88 ± 0.21 | |
| Temporal Lobe | 6.81 ± 0.23 | |
| Thalamus | 6.88 ± 0.28 | |
| White Matter | 7.89 ± 0.09 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Ticam2 | CB | Cerebellum | 100 | |
| 100 | | |||
| Ticam2 | CTX | Cerebral cortex | 100 | |
| 100 | | |||
| Ticam2 | HIP | Hippocampal region | 100 | |
| 100 | | |||
| Ticam2 | HPF | Hippocampal formation | 100 | |
| 100 | | |||
| Ticam2 | HY | Hypothalamus | 71.66 | |
| 63.97 | | |||
| Ticam2 | LSX | Lateral septal complex | 100 | |
| 100 | | |||
| Ticam2 | MB | Midbrain | 91.12 | |
| 92.35 | | |||
| Ticam2 | MY | Medulla | 95.17 | |
| 100 | | |||
| Ticam2 | OLF | Olfactory bulb | 100 | |
| 100 | | |||
| Ticam2 | P | Pons | 72.22 | |
| 74 | | |||
| Ticam2 | PAL | Pallidum | 82.81 | |
| 87.75 | | |||
| Ticam2 | RHP | Retrohippocampal region | 100 | |
| 100 | | |||
| Ticam2 | sAMY | Striatum-like amygdalar nuclei | 100 | |
| 100 | | |||
| Ticam2 | STR | Striatum | 100 | |
| 100 | | |||
| Ticam2 | STRd | Striatum dorsal region | 100 | |
| 100 | | |||
| Ticam2 | STRv | Striatum ventral region | 100 | |
| 100 | | |||
| Ticam2 | TH | Thalamus | 98.58 | |
| 99.76 | |