AutismKB 2.0

Annotation Detail for IL13RA1


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Basic Information Top
Gene Symbol:IL13RA1 ( CD213A1,IL-13Ra,NR4 )
Gene Full Name: interleukin 13 receptor, alpha 1
Band: Xq24
Quick LinksEntrez ID:3597; OMIM: 300119; Uniprot ID:I13R1_HUMAN; ENSEMBL ID: ENSG00000131724; HGNC ID: 5974
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body5 / 7076170
blastocyst0 / 623190 
fetus36 / 56401263
neonate1 / 3109732
infant0 / 236200 
juvenile4 / 5555671
adult139 / 193912171
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor3 / 12794234
bladder carcinoma1 / 1747557
breast (mammary gland) tumor7 / 9417874
cervical tumor3 / 3436687
chondrosarcoma10 / 82823120
colorectal tumor13 / 114246113
esophageal tumor0 / 172900 
gastrointestinal tumor14 / 119369117
germ cell tumor7 / 26384526
glioma10 / 10688393
head and neck tumor12 / 13630288
kidney tumor10 / 68959145
leukemia1 / 9584210
liver tumor11 / 96359114
lung tumor6 / 10312758
lymphoma1 / 7175513
non-neoplasia6 / 9725061
normal167 / 336030749
ovarian tumor7 / 7668291
pancreatic tumor10 / 10461695
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer3 / 10268029
retinoblastoma0 / 463560 
skin tumor5 / 12494940
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor16 / 90257177
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland3 / 3319790
ascites4 / 4001599
bladder3 / 29757100
blood4 / 12347832
bone6 / 7165583
bone marrow2 / 4880140
brain41 / 110098937
cervix3 / 4817162
connective tissue13 / 14925587
ear1 / 1621261
embryonic tissue6 / 21572227
esophagus0 / 202090 
eye10 / 21105447
heart4 / 8962644
intestine23 / 23447298
kidney22 / 211777103
larynx0 / 241450 
liver16 / 20774377
lung29 / 33697486
lymph0 / 442700 
lymph node0 / 916100 
mammary gland11 / 15327171
mouth3 / 6705244
muscle9 / 10771583
nerve2 / 15768126
ovary14 / 102051137
pancreas13 / 21481260
parathyroid0 / 205390 
pharynx1 / 4132824
pituitary gland0 / 165850 
placenta6 / 28082521
prostate8 / 18934542
salivary gland0 / 201550 
skin8 / 21057437
spleen2 / 5395237
stomach12 / 96619124
testis17 / 33044251
thymus3 / 8113136
thyroid9 / 47473189
tonsil0 / 169990 
trachea2 / 5241338
umbilical cord0 / 136800 
uterus24 / 232878103
vascular5 / 5178096
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 201887_at
Cell line Expression level Expression bar
721_B_lymphoblasts8.1
Adipocyte12.25
AdrenalCortex12.65
Adrenalgland9.35
Amygdala9.35
Appendix10.2
AtrioventricularNode7.85
BDCA4+_DentriticCells76.85
Bonemarrow7.7
BronchialEpithelialCells15.2
CD105+_Endothelial7.65
CD14+_Monocytes233.45
CD19+_BCells(neg._sel.)29.2
CD33+_Myeloid194.15
CD34+9.4
CD4+_Tcells7.6
CD56+_NKCells8.35
CD71+_EarlyErythroid7.25
CD8+_Tcells6.75
CardiacMyocytes47.15
Caudatenucleus6.9
Cerebellum6.1
CerebellumPeduncles8.75
CiliaryGanglion5.9
CingulateCortex7.8
Colorectaladenocarcinoma13.55
DorsalRootGanglion7.45
FetalThyroid12
Fetalbrain7.25
Fetalliver7.35
Fetallung30.4
GlobusPallidus5.8
Heart8.65
Hypothalamus19.1
Kidney6.6
Leukemia_chronicMyelogenousK-5626.85
Leukemia_promyelocytic-HL-606.6
Leukemialymphoblastic(MOLT-4)4.7
Liver10.85
Lung32.15
Lymphnode10.75
Lymphoma_burkitts(Daudi)7.65
Lymphoma_burkitts(Raji)11.2
MedullaOblongata6.85
OccipitalLobe6.55
OlfactoryBulb20
Ovary6
Pancreas12.15
PancreaticIslet31.65
ParietalLobe8.2
Pituitary13.2
Placenta8.65
Pons7.7
PrefrontalCortex9.85
Prostate9.55
Salivarygland7.05
SkeletalMuscle9.4
Skin7.05
SmoothMuscle48.9
Spinalcord18.35
SubthalamicNucleus7.15
SuperiorCervicalGanglion10.25
TemporalLobe7.25
Testis7.2
TestisGermCell7.2
TestisIntersitial6.75
TestisLeydigCell7.65
TestisSeminiferousTubule6.65
Thalamus7.55
Thymus5.85
Thyroid33.2
Tongue16.9
Tonsil8.65
Trachea10.5
TrigeminalGanglion7.95
Uterus13.9
UterusCorpus9.4
WholeBlood156.7
Wholebrain5.25
colon43.3
pineal_day10.32
pineal_night9.24
retina33.675
small_intestine42.35
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_24_P288685
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala4.04 ± 0.71
Basal Forebrain3.95 ± 0.42
Basal Part of Pons3.77 ± 0.43
Cerebellar Cortex3.31 ± 0.42
Cerebellar Nuclei4.81 ± 0.73
Claustrum3.79 ± 0.68
Epithalamus4.73 ± 0.75
Frontal Lobe3.89 ± 0.68
Globus Pallidus5.77 ± 0.38
Hypothalamus4.07 ± 0.81
Insula3.62 ± 0.59
Limbic Lobe3.62 ± 0.8
Mesencephalon4.13 ± 0.61
Myelencephalon3.9 ± 0.71
Occipital Lobe3.85 ± 0.87
Parietal Lobe3.87 ± 0.72
Pontine Tegmentum4.06 ± 0.93
Striatum4.74 ± 0.59
Subthalamus4.22 ± 0.72
Temporal Lobe3.76 ± 0.72
Thalamus4.1 ± 0.65
White Matter5.55 ± 0.51
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Il13ra1CBCerebellum1.88
2.33
Il13ra1CTXCerebral cortex1.65
1.45
Il13ra1HIPHippocampal region2.13
2.12
Il13ra1HPFHippocampal formation2.13
2.01
Il13ra1HYHypothalamus5.28
5.84
Il13ra1LSXLateral septal complex5.1
3.96
Il13ra1MBMidbrain3.98
5.96
Il13ra1MYMedulla1.86
2.58
Il13ra1OLFOlfactory bulb11.75
10.89
Il13ra1PPons3.07
7
Il13ra1PALPallidum2.15
2.86
Il13ra1RHPRetrohippocampal region1.63
1.25
Il13ra1sAMYStriatum-like amygdalar nuclei7.02
4.91
Il13ra1STRStriatum1.97
1.81
Il13ra1STRdStriatum dorsal region0.25
0.21
Il13ra1STRvStriatum ventral region3.43
4.17
Il13ra1THThalamus1.09
0.94
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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