Annotation Detail for IRF2BP2
Basic Information Top
| Gene Symbol: | IRF2BP2 ( MGC72189 ) |
|---|---|
| Gene Full Name: | interferon regulatory factor 2 binding protein 2 |
| Band: | 1q42.3 |
| Quick Links | Entrez ID:359948; OMIM: NA; Uniprot ID:I2BP2_HUMAN; ENSEMBL ID: ENSG00000168264; HGNC ID: 21729 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.350268
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 4 / 70761 | 56 |  |
| blastocyst | 3 / 62319 | 48 |  |
| fetus | 74 / 564012 | 131 | |
| neonate | 0 / 31097 | 0 | |
| infant | 4 / 23620 | 169 | |
| juvenile | 2 / 55556 | 35 | |
| adult | 192 / 1939121 | 99 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 2 / 12794 | 156 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 5 / 94178 | 53 | |
| cervical tumor | 4 / 34366 | 116 | |
| chondrosarcoma | 17 / 82823 | 205 |  |
| colorectal tumor | 17 / 114246 | 148 | |
| esophageal tumor | 1 / 17290 | 57 | |
| gastrointestinal tumor | 10 / 119369 | 83 | |
| germ cell tumor | 25 / 263845 | 94 | |
| glioma | 13 / 106883 | 121 | |
| head and neck tumor | 17 / 136302 | 124 | |
| kidney tumor | 4 / 68959 | 58 | |
| leukemia | 17 / 95842 | 177 | |
| liver tumor | 6 / 96359 | 62 | |
| lung tumor | 6 / 103127 | 58 | |
| lymphoma | 3 / 71755 | 41 | |
| non-neoplasia | 7 / 97250 | 71 | |
| normal | 331 / 3360307 | 98 | |
| ovarian tumor | 11 / 76682 | 143 | |
| pancreatic tumor | 11 / 104616 | 105 | |
| primitive neuroectodermal tumor of the CNS | 11 / 125680 | 87 | |
| prostate cancer | 4 / 102680 | 38 | |
| retinoblastoma | 3 / 46356 | 64 | |
| skin tumor | 6 / 124949 | 48 | |
| soft tissue/muscle tissue tumor | 7 / 125191 | 55 | |
| uterine tumor | 16 / 90257 | 177 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 7 / 13106 | 534 | |
| adrenal gland | 2 / 33197 | 60 | |
| ascites | 2 / 40015 | 49 | |
| bladder | 3 / 29757 | 100 | |
| blood | 14 / 123478 | 113 | |
| bone | 7 / 71655 | 97 | |
| bone marrow | 6 / 48801 | 122 | |
| brain | 72 / 1100989 | 65 | |
| cervix | 4 / 48171 | 83 | |
| connective tissue | 21 / 149255 | 140 | |
| ear | 2 / 16212 | 123 | |
| embryonic tissue | 12 / 215722 | 55 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 19 / 211054 | 90 | |
| heart | 10 / 89626 | 111 | |
| intestine | 35 / 234472 | 149 | |
| kidney | 31 / 211777 | 146 | |
| larynx | 1 / 24145 | 41 | |
| liver | 18 / 207743 | 86 | |
| lung | 40 / 336974 | 118 | |
| lymph | 1 / 44270 | 22 | |
| lymph node | 14 / 91610 | 152 | |
| mammary gland | 16 / 153271 | 104 | |
| mouth | 7 / 67052 | 104 | |
| muscle | 5 / 107715 | 46 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 15 / 102051 | 146 | |
| pancreas | 35 / 214812 | 162 | |
| parathyroid | 2 / 20539 | 97 | |
| pharynx | 6 / 41328 | 145 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 21 / 280825 | 74 | |
| prostate | 15 / 189345 | 79 | |
| salivary gland | 1 / 20155 | 49 | |
| skin | 13 / 210574 | 61 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 15 / 96619 | 155 | |
| testis | 18 / 330442 | 54 | |
| thymus | 2 / 81131 | 24 | |
| thyroid | 3 / 47473 | 63 | |
| tonsil | 1 / 16999 | 58 | |
| trachea | 2 / 52413 | 38 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 25 / 232878 | 107 | |
| vascular | 8 / 51780 | 154 | |
- Probe name: A_24_P154214
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 8.17 ± 0.37 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 8.48 ± 0.25 | |
| Basal Part of Pons | 8.52 ± 0.26 | |
| Cerebellar Cortex | 8.64 ± 0.11 | |
| Cerebellar Nuclei | 8.67 ± 0.23 | |
| Claustrum | 7.94 ± 0.32 | |
| Epithalamus | 9.13 ± 0.42 | |
| Frontal Lobe | 8.34 ± 0.3 | |
| Globus Pallidus | 8.7 ± 0.31 | |
| Hypothalamus | 8.56 ± 0.38 | |
| Insula | 8.29 ± 0.15 | |
| Limbic Lobe | 8.26 ± 0.36 | |
| Mesencephalon | 8.45 ± 0.32 | |
| Myelencephalon | 8.42 ± 0.29 | |
| Occipital Lobe | 8.7 ± 0.3 | |
| Parietal Lobe | 8.41 ± 0.28 | |
| Pontine Tegmentum | 8.38 ± 0.25 | |
| Striatum | 8.35 ± 0.36 | |
| Subthalamus | 8.45 ± 0.17 | |
| Temporal Lobe | 8.29 ± 0.28 | |
| Thalamus | 8.4 ± 0.24 | |
| White Matter | 9.61 ± 0.2 | |
Mouse Brain ISH 
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00004825 | 16 | 513 | 528 | LEDTHFVQCPSVPSHK | Peptide Atlas |