AutismKB 2.0

Annotation Detail for ILF2


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Basic Information Top
Gene Symbol:ILF2 ( MGC8391,NF45,PRO3063 )
Gene Full Name: interleukin enhancer binding factor 2, 45kDa
Band: 1q21.3
Quick LinksEntrez ID:3608; OMIM: 603181; Uniprot ID:ILF2_HUMAN; ENSEMBL ID: ENSG00000143621; HGNC ID: 6037
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body29 / 70761409
blastocyst26 / 62319417
fetus147 / 564012260
neonate3 / 3109796
infant16 / 23620677
juvenile19 / 55556341
adult376 / 1939121193
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor2 / 12794156
bladder carcinoma4 / 17475228
breast (mammary gland) tumor23 / 94178244
cervical tumor10 / 34366290
chondrosarcoma15 / 82823181
colorectal tumor34 / 114246297
esophageal tumor2 / 17290115
gastrointestinal tumor32 / 119369268
germ cell tumor71 / 263845269
glioma12 / 106883112
head and neck tumor21 / 136302154
kidney tumor11 / 68959159
leukemia24 / 95842250
liver tumor28 / 96359290
lung tumor33 / 103127319
lymphoma22 / 71755306
non-neoplasia10 / 97250102
normal661 / 3360307196
ovarian tumor14 / 76682182
pancreatic tumor20 / 104616191
primitive neuroectodermal tumor of the CNS63 / 125680501
prostate cancer23 / 102680223
retinoblastoma35 / 46356755
skin tumor37 / 124949296
soft tissue/muscle tissue tumor48 / 125191383
uterine tumor33 / 90257365
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue2 / 13106152
adrenal gland9 / 33197271
ascites12 / 40015299
bladder5 / 29757168
blood42 / 123478340
bone26 / 71655362
bone marrow15 / 48801307
brain187 / 1100989169
cervix10 / 48171207
connective tissue18 / 149255120
ear8 / 16212493
embryonic tissue104 / 215722482
esophagus3 / 20209148
eye45 / 211054213
heart25 / 89626278
intestine61 / 234472260
kidney25 / 211777118
larynx3 / 24145124
liver42 / 207743202
lung77 / 336974228
lymph13 / 44270293
lymph node18 / 91610196
mammary gland30 / 153271195
mouth11 / 67052164
muscle9 / 10771583
nerve3 / 15768190
ovary16 / 102051156
pancreas25 / 214812116
parathyroid4 / 20539194
pharynx26 / 41328629
pituitary gland7 / 16585422
placenta102 / 280825363
prostate36 / 189345190
salivary gland5 / 20155248
skin56 / 210574265
spleen2 / 5395237
stomach14 / 96619144
testis71 / 330442214
thymus20 / 81131246
thyroid4 / 4747384
tonsil1 / 1699958
trachea3 / 5241357
umbilical cord2 / 13680146
uterus80 / 232878343
vascular10 / 51780193
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 200052_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts668.15
Adipocyte62.4
AdrenalCortex42.2
Adrenalgland55.75
Amygdala36.25
Appendix29
AtrioventricularNode27.35
BDCA4+_DentriticCells364.35
Bonemarrow82.55
BronchialEpithelialCells237
CD105+_Endothelial485.15
CD14+_Monocytes153.5
CD19+_BCells(neg._sel.)227.55
CD33+_Myeloid207.1
CD34+603.1
CD4+_Tcells150.9
CD56+_NKCells199.2
CD71+_EarlyErythroid205.35
CD8+_Tcells144.8
CardiacMyocytes171
Caudatenucleus29.2
Cerebellum25.95
CerebellumPeduncles36.55
CiliaryGanglion25.3
CingulateCortex34.35
Colorectaladenocarcinoma54.65
DorsalRootGanglion27.9
FetalThyroid46.45
Fetalbrain96.4
Fetalliver74.45
Fetallung98.35
GlobusPallidus35.55
Heart22.85
Hypothalamus87.9
Kidney60.45
Leukemia_chronicMyelogenousK-562196.3
Leukemia_promyelocytic-HL-60147.8
Leukemialymphoblastic(MOLT-4)281.4
Liver25.7
Lung30.25
Lymphnode58
Lymphoma_burkitts(Daudi)302.5
Lymphoma_burkitts(Raji)59.5
MedullaOblongata28.1
OccipitalLobe45.05
OlfactoryBulb30.8
Ovary27.95
Pancreas51.8
PancreaticIslet127.25
ParietalLobe23.8
Pituitary98.5
Placenta108.15
Pons29.9
PrefrontalCortex45.95
Prostate38.85
Salivarygland64.75
SkeletalMuscle26.2
Skin38.05
SmoothMuscle183.3
Spinalcord49.55
SubthalamicNucleus32.4
SuperiorCervicalGanglion24.9
TemporalLobe24.8
Testis164.2
TestisGermCell129.05
TestisIntersitial144.95
TestisLeydigCell100.6
TestisSeminiferousTubule114.7
Thalamus45.25
Thymus196.75
Thyroid66.1
Tongue33.15
Tonsil95.65
Trachea44.6
TrigeminalGanglion27.05
Uterus41.45
UterusCorpus26.15
WholeBlood59.55
Wholebrain41.1
colon96.65
pineal_day105.74
pineal_night111.06
retina101.25
small_intestine142.8
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_6138_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala4.9 ± 0.65
Basal Forebrain5.18 ± 0.29
Basal Part of Pons5.22 ± 0.65
Cerebellar Cortex5.57 ± 0.27
Cerebellar Nuclei5.15 ± 0.43
Claustrum4.72 ± 0.73
Epithalamus5.31 ± 0.38
Frontal Lobe5.27 ± 0.48
Globus Pallidus5.05 ± 0.29
Hypothalamus5.25 ± 0.56
Insula5.36 ± 0.29
Limbic Lobe5.01 ± 0.58
Mesencephalon5.2 ± 0.5
Myelencephalon5.21 ± 0.51
Occipital Lobe4.92 ± 0.68
Parietal Lobe5.1 ± 0.44
Pontine Tegmentum5.11 ± 0.56
Striatum4.77 ± 0.39
Subthalamus4.82 ± 0.55
Temporal Lobe5.27 ± 0.44
Thalamus5.25 ± 0.5
White Matter5.84 ± 0.23
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Ilf2CBCerebellum74.83
100
Ilf2CTXCerebral cortex100
100
Ilf2HIPHippocampal region100
100
Ilf2HPFHippocampal formation100
100
Ilf2HYHypothalamus89.67
97.49
Ilf2LSXLateral septal complex61.12
64.69
Ilf2MBMidbrain44.87
52.34
Ilf2MYMedulla59.27
94.27
Ilf2OLFOlfactory bulb100
100
Ilf2PPons54.58
78.36
Ilf2PALPallidum77.74
93.92
Ilf2RHPRetrohippocampal region100
100
Ilf2sAMYStriatum-like amygdalar nuclei100
100
Ilf2STRStriatum100
100
Ilf2STRdStriatum dorsal region100
100
Ilf2STRvStriatum ventral region100
100
Ilf2THThalamus63.74
73.87
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
ILF2_HUMAN_128 14 128 141 ILPTLEAVAALGNK PRIDE
ILF2_HUMAN_25 19 25 43 PFVPHIPFDFYLCEMAFPR PRIDE
ILF2_HUMAN_260 10 260 269 QPLALNVAYR PRIDE
PAp00034945 14 128 141 ILPTLEAVAALGNK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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