AutismKB 2.0

Annotation Detail for INCENP


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Basic Information Top
Gene Symbol:INCENP ( FLJ31633,MGC111393 )
Gene Full Name: inner centromere protein antigens 135/155kDa
Band: 11q12.3
Quick LinksEntrez ID:3619; OMIM: 604411; Uniprot ID:INCE_HUMAN; ENSEMBL ID: ENSG00000149503; HGNC ID: 6058
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body2 / 7076128
blastocyst1 / 6231916
fetus3 / 5640125
neonate0 / 310970 
infant0 / 236200 
juvenile3 / 5555653
adult24 / 193912112
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor7 / 9417874
cervical tumor0 / 343660 
chondrosarcoma2 / 8282324
colorectal tumor2 / 11424617
esophageal tumor4 / 17290231
gastrointestinal tumor2 / 11936916
germ cell tumor6 / 26384522
glioma0 / 1068830 
head and neck tumor2 / 13630214
kidney tumor0 / 689590 
leukemia3 / 9584231
liver tumor1 / 9635910
lung tumor2 / 10312719
lymphoma0 / 717550 
non-neoplasia1 / 9725010
normal25 / 33603077
ovarian tumor2 / 7668226
pancreatic tumor2 / 10461619
primitive neuroectodermal tumor of the CNS2 / 12568015
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor7 / 12494956
soft tissue/muscle tissue tumor1 / 1251917
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland0 / 331970 
ascites1 / 4001524
bladder0 / 297570 
blood4 / 12347832
bone0 / 716550 
bone marrow1 / 4880120
brain8 / 11009897
cervix3 / 4817162
connective tissue1 / 1492556
ear0 / 162120 
embryonic tissue4 / 21572218
esophagus4 / 20209197
eye1 / 2110544
heart0 / 896260 
intestine3 / 23447212
kidney1 / 2117774
larynx1 / 2414541
liver1 / 2077434
lung4 / 33697411
lymph0 / 442700 
lymph node1 / 9161010
mammary gland9 / 15327158
mouth1 / 6705214
muscle0 / 1077150 
nerve0 / 157680 
ovary4 / 10205139
pancreas2 / 2148129
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta2 / 2808257
prostate0 / 1893450 
salivary gland0 / 201550 
skin8 / 21057437
spleen1 / 5395218
stomach1 / 9661910
testis3 / 3304429
thymus8 / 8113198
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus1 / 2328784
vascular2 / 5178038
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 219769_at
Cell line Expression level Expression bar
721_B_lymphoblasts5.25
Adipocyte3.2
AdrenalCortex3.45
Adrenalgland2.85
Amygdala3.5
Appendix3.35
AtrioventricularNode2.5
BDCA4+_DentriticCells3.6
Bonemarrow3.4
BronchialEpithelialCells3.25
CD105+_Endothelial3.35
CD14+_Monocytes3.5
CD19+_BCells(neg._sel.)3.6
CD33+_Myeloid4.3
CD34+4.2
CD4+_Tcells3.55
CD56+_NKCells4
CD71+_EarlyErythroid3.15
CD8+_Tcells3.1
CardiacMyocytes4.5
Caudatenucleus2.95
Cerebellum2.7
CerebellumPeduncles3.8
CiliaryGanglion2.4
CingulateCortex3.35
Colorectaladenocarcinoma3.45
DorsalRootGanglion2.5
FetalThyroid3.25
Fetalbrain3.3
Fetalliver2.85
Fetallung2.75
GlobusPallidus2.4
Heart4.5
Hypothalamus3.6
Kidney2.7
Leukemia_chronicMyelogenousK-5622.95
Leukemia_promyelocytic-HL-603.2
Leukemialymphoblastic(MOLT-4)4.2
Liver4.45
Lung3.65
Lymphnode2.85
Lymphoma_burkitts(Daudi)4.2
Lymphoma_burkitts(Raji)4.8
MedullaOblongata3.05
OccipitalLobe3
OlfactoryBulb2.6
Ovary2.2
Pancreas2.65
PancreaticIslet3.55
ParietalLobe3.5
Pituitary3.9
Placenta3.45
Pons3.15
PrefrontalCortex4.1
Prostate3.9
Salivarygland2.65
SkeletalMuscle3.8
Skin2.55
SmoothMuscle3.8
Spinalcord3.55
SubthalamicNucleus3
SuperiorCervicalGanglion3.7
TemporalLobe3.05
Testis2.85
TestisGermCell2.8
TestisIntersitial2.8
TestisLeydigCell3.25
TestisSeminiferousTubule2.85
Thalamus3.35
Thymus2.65
Thyroid4.15
Tongue3.2
Tonsil3.25
Trachea2.8
TrigeminalGanglion3.3
Uterus2.7
UterusCorpus3.05
WholeBlood3.65
Wholebrain2.85
colon3.35
pineal_day4.06
pineal_night4
retina3.975
small_intestine3.2
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_4822_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala2.63 ± 1.02
Basal Forebrain1.95 ± 0.22
Basal Part of Pons1.84 ± 0.39
Cerebellar Cortex2.58 ± 0.59
Cerebellar Nuclei2.42 ± 0.67
Claustrum2.73 ± 0.67
Epithalamus1.91 ± 0.83
Frontal Lobe2.21 ± 0.82
Globus Pallidus2 ± 0.6
Hypothalamus2.16 ± 0.93
Insula1.81 ± 0.68
Limbic Lobe2.34 ± 0.68
Mesencephalon2.44 ± 0.77
Myelencephalon2.28 ± 0.66
Occipital Lobe2.33 ± 0.73
Parietal Lobe2.33 ± 0.77
Pontine Tegmentum2.27 ± 0.73
Striatum1.81 ± 0.71
Subthalamus2.26 ± 0.72
Temporal Lobe2.31 ± 0.67
Thalamus2.21 ± 0.65
White Matter1.32 ± 0.52
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
IncenpCBCerebellum8.07
9.15
IncenpCTXCerebral cortex1.35
1.08
IncenpHIPHippocampal region2.36
2.08
IncenpHPFHippocampal formation1.77
1.45
IncenpHYHypothalamus0.74
0.56
IncenpLSXLateral septal complex0.59
0.56
IncenpMBMidbrain0.72
0.72
IncenpMYMedulla2.88
2.98
IncenpOLFOlfactory bulb6.24
4.93
IncenpPPons2.17
2.24
IncenpPALPallidum0.48
0.33
IncenpRHPRetrohippocampal region0.81
0.59
IncenpsAMYStriatum-like amygdalar nuclei0.43
0.25
IncenpSTRStriatum0.6
0.49
IncenpSTRdStriatum dorsal region0.39
0.41
IncenpSTRvStriatum ventral region1.35
0.83
IncenpTHThalamus1.03
0.85
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00045772 17 281 297 VLAPILPDNFSTPTGSR Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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