AutismKB 2.0

Annotation Detail for AQP9


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Basic Information Top
Gene Symbol:AQP9 ( AQP-9,HsT17287,SSC1 )
Gene Full Name: aquaporin 9
Band: 15q21.3
Quick LinksEntrez ID:366; OMIM: 602914; Uniprot ID:AQP9_HUMAN; ENSEMBL ID: ENSG00000103569; HGNC ID: 643
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus3 / 5640125
neonate1 / 3109732
infant0 / 236200 
juvenile0 / 555560 
adult23 / 193912111
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma2 / 8282324
colorectal tumor2 / 11424617
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor0 / 2638450 
glioma2 / 10688318
head and neck tumor0 / 1363020 
kidney tumor1 / 6895914
leukemia0 / 958420 
liver tumor11 / 96359114
lung tumor3 / 10312729
lymphoma0 / 717550 
non-neoplasia1 / 9725010
normal66 / 336030719
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood27 / 123478218
bone1 / 7165513
bone marrow1 / 4880120
brain3 / 11009892
cervix0 / 481710 
connective tissue1 / 1492556
ear0 / 162120 
embryonic tissue0 / 2157220 
esophagus0 / 202090 
eye0 / 2110540 
heart0 / 896260 
intestine5 / 23447221
kidney2 / 2117779
larynx0 / 241450 
liver34 / 207743163
lung6 / 33697417
lymph0 / 442700 
lymph node0 / 916100 
mammary gland0 / 1532710 
mouth0 / 670520 
muscle0 / 1077150 
nerve0 / 157680 
ovary0 / 1020510 
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta0 / 2808250 
prostate0 / 1893450 
salivary gland0 / 201550 
skin0 / 2105740 
spleen6 / 53952111
stomach1 / 9661910
testis0 / 3304420 
thymus2 / 8113124
thyroid1 / 4747321
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus0 / 2328780 
vascular1 / 5178019
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 205568_at
Cell line Expression level Expression bar
721_B_lymphoblasts4.95
Adipocyte3.45
AdrenalCortex3.6
Adrenalgland4.35
Amygdala3.7
Appendix3.6
AtrioventricularNode2.65
BDCA4+_DentriticCells4
Bonemarrow5.95
BronchialEpithelialCells3.45
CD105+_Endothelial3.5
CD14+_Monocytes231.1
CD19+_BCells(neg._sel.)3.75
CD33+_Myeloid44.8
CD34+4.45
CD4+_Tcells3.8
CD56+_NKCells4.25
CD71+_EarlyErythroid3.25
CD8+_Tcells3.4
CardiacMyocytes4.5
Caudatenucleus3.15
Cerebellum2.8
CerebellumPeduncles3.95
CiliaryGanglion2.55
CingulateCortex4.3
Colorectaladenocarcinoma3.5
DorsalRootGanglion2.75
FetalThyroid3.4
Fetalbrain3.5
Fetalliver3
Fetallung4.25
GlobusPallidus2.55
Heart4.4
Hypothalamus3.8
Kidney2.85
Leukemia_chronicMyelogenousK-5623.15
Leukemia_promyelocytic-HL-603.1
Leukemialymphoblastic(MOLT-4)2.8
Liver25.55
Lung3.9
Lymphnode3.1
Lymphoma_burkitts(Daudi)4.45
Lymphoma_burkitts(Raji)4.8
MedullaOblongata3.25
OccipitalLobe3.2
OlfactoryBulb2.75
Ovary2.3
Pancreas2.8
PancreaticIslet3.7
ParietalLobe3.65
Pituitary4.8
Placenta3.7
Pons3.3
PrefrontalCortex4.45
Prostate4.15
Salivarygland2.8
SkeletalMuscle3.95
Skin3
SmoothMuscle4
Spinalcord3.75
SubthalamicNucleus3.2
SuperiorCervicalGanglion3.9
TemporalLobe3.2
Testis3
TestisGermCell2.95
TestisIntersitial2.95
TestisLeydigCell3.45
TestisSeminiferousTubule3
Thalamus3.55
Thymus2.8
Thyroid4.35
Tongue3.45
Tonsil3.45
Trachea2.9
TrigeminalGanglion3.5
Uterus2.85
UterusCorpus3.15
WholeBlood2089.45
Wholebrain2.95
colon3.5
pineal_day4.34
pineal_night4.28
retina4.275
small_intestine3.4
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_15292_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala2.12 ± 1.04
Basal Forebrain1.6 ± 0.21
Basal Part of Pons1.29 ± 0.33
Cerebellar Cortex1.47 ± 0.67
Cerebellar Nuclei2.01 ± 0.77
Claustrum2.55 ± 1
Epithalamus1.38 ± 0.77
Frontal Lobe1.58 ± 0.64
Globus Pallidus2.2 ± 0.3
Hypothalamus1.66 ± 0.68
Insula1.57 ± 0.77
Limbic Lobe1.68 ± 0.63
Mesencephalon1.81 ± 0.64
Myelencephalon1.67 ± 0.64
Occipital Lobe1.81 ± 1.07
Parietal Lobe1.56 ± 0.49
Pontine Tegmentum1.78 ± 0.76
Striatum1.79 ± 0.55
Subthalamus1.85 ± 0.67
Temporal Lobe1.56 ± 0.61
Thalamus1.62 ± 0.6
White Matter2.09 ± 0.29
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Aqp9CBCerebellum6.43
4.51
Aqp9CTXCerebral cortex9.23
6.76
Aqp9HIPHippocampal region7.85
3.84
Aqp9HPFHippocampal formation7.82
5.31
Aqp9HYHypothalamus5.97
3.84
Aqp9LSXLateral septal complex0.74
0.6
Aqp9MBMidbrain1.47
1.22
Aqp9MYMedulla7.04
5.26
Aqp9OLFOlfactory bulb12.01
9.38
Aqp9PPons4.92
3.87
Aqp9PALPallidum1.37
1.08
Aqp9RHPRetrohippocampal region8.08
8.29
Aqp9sAMYStriatum-like amygdalar nuclei2.2
1.45
Aqp9STRStriatum1.9
1.3
Aqp9STRdStriatum dorsal region1.2
0.78
Aqp9STRvStriatum ventral region5.31
3.57
Aqp9THThalamus4.4
2.79
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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