AutismKB 2.0

Annotation Detail for ITGAD


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Basic Information Top
Gene Symbol:ITGAD ( ADB2,CD11D,FLJ39841 )
Gene Full Name: integrin, alpha D
Band: 16p11.2
Quick LinksEntrez ID:3681; OMIM: 602453; Uniprot ID:ITAD_HUMAN; ENSEMBL ID: ENSG00000156886; HGNC ID: 6146
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus0 / 5640120 
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult3 / 19391211
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor1 / 2638453
glioma0 / 1068830 
head and neck tumor0 / 1363020 
kidney tumor0 / 689590 
leukemia0 / 958420 
liver tumor0 / 963590 
lung tumor1 / 1031279
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal15 / 33603074
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone0 / 716550 
bone marrow0 / 488010 
brain1 / 11009890 
cervix0 / 481710 
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue0 / 2157220 
esophagus0 / 202090 
eye0 / 2110540 
heart0 / 896260 
intestine0 / 2344720 
kidney0 / 2117770 
larynx0 / 241450 
liver0 / 2077430 
lung1 / 3369742
lymph0 / 442700 
lymph node0 / 916100 
mammary gland0 / 1532710 
mouth0 / 670520 
muscle2 / 10771518
nerve0 / 157680 
ovary0 / 1020510 
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta0 / 2808250 
prostate0 / 1893450 
salivary gland0 / 201550 
skin0 / 2105740 
spleen5 / 5395292
stomach0 / 966190 
testis0 / 3304420 
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus0 / 2328780 
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: Primary tumors (U95A)
  • Affymatrix Probe ID: 833_at
Cell line Expression level Expression bar
Pr1T6.088
Pr4T8.121
Pr5T7.24
Pr7T7.654
Pr1N8.172
Pr5N7.719
Pr6T9.489
Pr3N7.792
Pr3T8.29
Pr4N7.566
Pr2N7.247
Pr8N7.813
Pr8T8.69
Pr9N7.558
Pr10N8.061
Pr10T8.415
Pr9T7.657
Pr11T7.946
Pr12T7.458
Pr13AT8.334
Pr13BT7.912
Pr21T8.008
Pr22T8.052
Pr30T9.167
Pr23T9.064
Pr19T8.529
Pr26T8.368
Pr31T8.119
Pr16T8.527
Pr17T8.488
Pr24T7.762
Pr27T7.228
Pr29T6.528
OVR1027.869
HUOVR7.583
G29.209
G38.864
G58.28
G68.427
G87.896
G98.361
CO7T9.225
CO8T8.05
CO15T10.134
CO27T9.134
CO30T9.504
CO32T8.631
CO40T8.497
CO52N10.538
CO62N9.67
K17.886
K27.994
K37.063
K48.394
K14N10.001
K168.573
K1710.093
K198.578
K208.505
K228.07
CO9T8.681
CO20T13.54
CO24T11.522
CO36N10.615
K188.019
P1N7.996
P2N8.916
P5N9.469
P88.282
P116.926
P178.793
K219.307
K25N9.74
K28N10.575
CO42T9.104
P227.344
P13N8.09
LU11T8.545
LU16T9.215
LU7T8.116
LU8T8.166
LU12T8.598
LU13T9.517
LU5T9.369
LU6T10.759
LU14T8.773
LU17T9.044
LU50N7.827
LU52N8.867
LU18T9.046
LU55N9.217
LU3N9.77
P16B11.54
P238.463
OVR167.802
OVR197.779
OVR278.202
OVR287.84
OVR278E8.768
OVR28.048
OVR57.929
OVR88.868
OVR118.655
OVR128.72
OVR137.988
OVR229.135
OVR268.979
OVR1010.273
OVR278S9.791
OVR18.246
LU19T8.09
LU20T8.513
LU24T8.731
LU25T8.633
LU31T10.535
LU34T9.361
LU39T7.421
CO14T9.16
CO21T10.12
CO23T9.031
CO41N8.235
LU40T9.75
LU41T7.941
LU44T8.822
LU46T8.692
LU49T8.602
L5N9.185
LU42T8.788
LU30T9.148
LU43T10.394
CO5T9.133
CO44T8.144
CO49T8.801
CO51T8.959
CO56T8.331
CO61T8.346
LU26T10.005
LU33T9.903
LU36T8.336
CO43T9.21
G189.487
G468.12
L11T10.005
L13N9.315
L30T9.764
L31T10.355
L32T10.152
L34T10.058
L35T10.844
B1N9.875
B5N8.621
B8T9.047
B10T8.761
B14T9.775
B16T8.687
B17T8.825
B1NR9.675
B20T12.405
B51NR10.204
B6T10.625
B15T18.035
B21T14.562
B29T9.073
B31T10.166
B32T11.254
B24T8.553
B46T11.013
B34T9.838
B36T9.054
B37T9.638
B38T9.087
B39T8.224
X1028.849
X116_028.97
G2808.131
X468.078
X588.091
G1869.33
G2968.753
L38T8.81
L31T.28.464
L26N9.499
N257ANTR10.728
N285BODY8.285
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_24_P366652
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala3.7 ± 0.86
Basal Forebrain3.64 ± 0.29
Basal Part of Pons3.37 ± 0.81
Cerebellar Cortex2.86 ± 0.65
Cerebellar Nuclei3.2 ± 0.67
Claustrum4.08 ± 0.86
Epithalamus2.82 ± 0.44
Frontal Lobe3.22 ± 0.71
Globus Pallidus4.22 ± 0.36
Hypothalamus3.19 ± 0.44
Insula2.9 ± 0.74
Limbic Lobe3.53 ± 0.77
Mesencephalon3.35 ± 0.75
Myelencephalon3.46 ± 0.76
Occipital Lobe3.3 ± 0.87
Parietal Lobe3.31 ± 0.75
Pontine Tegmentum3.18 ± 0.69
Striatum3.47 ± 0.73
Subthalamus3.57 ± 0.42
Temporal Lobe3.29 ± 0.79
Thalamus3.29 ± 0.69
White Matter3.92 ± 0.73
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
ItgadCBCerebellum2.49
4.31
ItgadCTXCerebral cortex1.74
2.78
ItgadHIPHippocampal region0.72
0.79
ItgadHPFHippocampal formation0.58
0.61
ItgadHYHypothalamus0.18
0.7
ItgadLSXLateral septal complex0.09
0.18
ItgadMBMidbrain1.22
2.12
ItgadMYMedulla1.41
1.9
ItgadOLFOlfactory bulb3.09
5.09
ItgadPPons1.21
1.26
ItgadPALPallidum0.05
0.1
ItgadRHPRetrohippocampal region0.29
0.26
ItgadsAMYStriatum-like amygdalar nuclei0.14
0.17
ItgadSTRStriatum0.1
0.1
ItgadSTRdStriatum dorsal region0.09
0.07
ItgadSTRvStriatum ventral region0.12
0.13
ItgadTHThalamus0.38
0.46
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
ITAD_HUMAN_0 0 0 0 AVIFTQVSR PRIDE
ITAD_HUMAN_0 0 0 0 GGQVSVCPLPR PRIDE
ITAD_HUMAN_0 0 0 0 IHFTFTQFRTSPSQQSLVDPIVQLK PRIDE
PAp00492319 11 488 498 GGQVSVCPLPR Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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