AutismKB 2.0

Annotation Detail for CD82


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Basic Information Top
Gene Symbol:CD82 ( 4F9,C33,GR15,IA4,KAI1,R2,SAR2,ST6,TSPAN27 )
Gene Full Name: CD82 molecule
Band: 11p11.2
Quick LinksEntrez ID:3732; OMIM: 600623; Uniprot ID:CD82_HUMAN; ENSEMBL ID: ENSG00000085117; HGNC ID: 6210
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body3 / 7076142
blastocyst1 / 6231916
fetus17 / 56401230
neonate1 / 3109732
infant0 / 236200 
juvenile3 / 5555653
adult106 / 193912154
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor1 / 1279478
bladder carcinoma0 / 174750 
breast (mammary gland) tumor3 / 9417831
cervical tumor2 / 3436658
chondrosarcoma1 / 8282312
colorectal tumor32 / 114246280
esophageal tumor1 / 1729057
gastrointestinal tumor10 / 11936983
germ cell tumor11 / 26384541
glioma7 / 10688365
head and neck tumor10 / 13630273
kidney tumor9 / 68959130
leukemia9 / 9584293
liver tumor2 / 9635920
lung tumor0 / 1031270 
lymphoma4 / 7175555
non-neoplasia7 / 9725071
normal149 / 336030744
ovarian tumor5 / 7668265
pancreatic tumor8 / 10461676
primitive neuroectodermal tumor of the CNS1 / 1256807
prostate cancer1 / 1026809
retinoblastoma0 / 463560 
skin tumor13 / 124949104
soft tissue/muscle tissue tumor13 / 125191103
uterine tumor5 / 9025755
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue2 / 13106152
adrenal gland1 / 3319730
ascites2 / 4001549
bladder0 / 297570 
blood10 / 12347880
bone0 / 716550 
bone marrow6 / 48801122
brain30 / 110098927
cervix2 / 4817141
connective tissue4 / 14925526
ear0 / 162120 
embryonic tissue8 / 21572237
esophagus2 / 2020998
eye9 / 21105442
heart0 / 896260 
intestine36 / 234472153
kidney12 / 21177756
larynx2 / 2414582
liver4 / 20774319
lung25 / 33697474
lymph4 / 4427090
lymph node1 / 9161010
mammary gland5 / 15327132
mouth6 / 6705289
muscle14 / 107715129
nerve0 / 157680 
ovary7 / 10205168
pancreas13 / 21481260
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta23 / 28082581
prostate3 / 18934515
salivary gland0 / 201550 
skin15 / 21057471
spleen2 / 5395237
stomach10 / 96619103
testis2 / 3304426
thymus10 / 81131123
thyroid4 / 4747384
tonsil13 / 16999764
trachea3 / 5241357
umbilical cord1 / 1368073
uterus8 / 23287834
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 203904_x_at
Cell line Expression level Expression bar
721_B_lymphoblasts293.5
Adipocyte155.85
AdrenalCortex173.3
Adrenalgland144
Amygdala116.15
Appendix179.65
AtrioventricularNode152.3
BDCA4+_DentriticCells106.25
Bonemarrow217.7
BronchialEpithelialCells140.55
CD105+_Endothelial197.2
CD14+_Monocytes143.05
CD19+_BCells(neg._sel.)144.55
CD33+_Myeloid190.6
CD34+213.9
CD4+_Tcells187.65
CD56+_NKCells91.55
CD71+_EarlyErythroid160.25
CD8+_Tcells157.55
CardiacMyocytes99.55
Caudatenucleus152.05
Cerebellum131.65
CerebellumPeduncles276.7
CiliaryGanglion176.85
CingulateCortex177.45
Colorectaladenocarcinoma170
DorsalRootGanglion153
FetalThyroid134.5
Fetalbrain159.2
Fetalliver143.1
Fetallung152.6
GlobusPallidus125.9
Heart185.4
Hypothalamus213.1
Kidney125.2
Leukemia_chronicMyelogenousK-562153.1
Leukemia_promyelocytic-HL-60157.05
Leukemialymphoblastic(MOLT-4)155.65
Liver183.05
Lung192.6
Lymphnode178.3
Lymphoma_burkitts(Daudi)215.55
Lymphoma_burkitts(Raji)419.95
MedullaOblongata236.15
OccipitalLobe160.05
OlfactoryBulb136.35
Ovary113.4
Pancreas163.1
PancreaticIslet271.75
ParietalLobe226.95
Pituitary192.45
Placenta220.1
Pons239.65
PrefrontalCortex124.55
Prostate196.45
Salivarygland142.7
SkeletalMuscle230.05
Skin158.5
SmoothMuscle112.5
Spinalcord215.35
SubthalamicNucleus150.2
SuperiorCervicalGanglion206.4
TemporalLobe294.8
Testis121.7
TestisGermCell114.05
TestisIntersitial142.1
TestisLeydigCell171.95
TestisSeminiferousTubule152.05
Thalamus195.8
Thymus150.75
Thyroid146.9
Tongue200.95
Tonsil290.25
Trachea170.4
TrigeminalGanglion178.6
Uterus64.55
UterusCorpus156.55
WholeBlood169.45
Wholebrain99.9
colon82.95
pineal_day194.42
pineal_night207.92
retina210.95
small_intestine137.1
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_15089_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala3.56 ± 0.75
Basal Forebrain4.09 ± 1.08
Basal Part of Pons3.52 ± 0.74
Cerebellar Cortex3.89 ± 0.64
Cerebellar Nuclei3.98 ± 0.84
Claustrum3.3 ± 0.51
Epithalamus3.93 ± 0.57
Frontal Lobe3.64 ± 0.81
Globus Pallidus4.76 ± 0.48
Hypothalamus3.33 ± 0.51
Insula3.07 ± 0.72
Limbic Lobe3.48 ± 0.68
Mesencephalon3.96 ± 0.74
Myelencephalon3.81 ± 0.66
Occipital Lobe3.9 ± 0.57
Parietal Lobe3.61 ± 0.76
Pontine Tegmentum3.59 ± 0.75
Striatum4.13 ± 0.66
Subthalamus3.35 ± 0.3
Temporal Lobe3.47 ± 0.67
Thalamus4.06 ± 0.6
White Matter5.1 ± 0.54
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Cd82CBCerebellum14.81
17.44
Cd82CTXCerebral cortex16.59
12.75
Cd82HIPHippocampal region20.66
27.1
Cd82HPFHippocampal formation13.79
15.68
Cd82HYHypothalamus12.22
7.99
Cd82LSXLateral septal complex20.25
14.93
Cd82MBMidbrain24.22
18.7
Cd82MYMedulla25.87
20.9
Cd82OLFOlfactory bulb16.73
11.45
Cd82PPons28.35
22.32
Cd82PALPallidum19.12
13.6
Cd82RHPRetrohippocampal region7.25
6.18
Cd82sAMYStriatum-like amygdalar nuclei7.78
5.04
Cd82STRStriatum20.91
14.63
Cd82STRdStriatum dorsal region26.48
19.11
Cd82STRvStriatum ventral region9.56
5.77
Cd82THThalamus20.45
15.91
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
CD82_HUMAN_113 14 113 126 LKQEMGGIVTELIR PRIDE
CD82_HUMAN_115 12 115 126 QEMGGIVTELIR PRIDE

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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